Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq259 104 4e-17 seq4831 89.7 8e-13 >seq259 Length=51451 Score = 104 bits (114), Expect = 4e-17 Identities = 109/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || ||||||| || ||||||||||| || ||| |||| | || | Sbjct 12105 ATGCAAATTTTCGTAAAGACCCTCACAGGCAAAACGATCACTTTAGAAGTCGAGCCTTCA 12164 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| ||||| || || ||||| ||||||||||| || ||||||||||| Sbjct 12165 GATACCATTGAAAATGTTAAAGCA-AAGATTCAGGATAAAGAAGGAATTCCACCTGATCA 12223 Query 124658 ACAAAGGCTTATTTTTGCAGG 124678 ||| | ||||||||||| || Sbjct 12224 GCAACGACTTATTTTTGCTGG 12244 Score = 102 bits (112), Expect = 1e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | ||||| || |||||||| || || || | || |||||||| Sbjct 12675 AATGCAAATTTTTGTCAAGACGCTTACAGGCAAGACAATTACCTTGGAAGTTGAAGCATC 12734 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | || ||| ||||| ||||||||||| || || || ||||| Sbjct 12735 GGACACGATTGAAAATGTTAAGGCGAAGATTCAGGATAAAGAAGGGATTCCTCCGGATCA 12794 Query 124658 ACAAAGGCTTATTTTTGCAGGAAA 124681 ||| || |||||||||||||| || Sbjct 12795 ACAGAGACTTATTTTTGCAGGTAA 12818 >seq4831 Length=15448 Score = 89.7 bits (98), Expect = 8e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 124640 AGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCG 124699 ||| || ||||||||||| || || | |||||||| |||||||| ||||| ||| | || Sbjct 8781 AGGAATTCCACCTGATCAGCAGAGATTGATTTTTGCCGGAAAACAGTTAGAAGATGGCCG 8722 Query 124700 AACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTT 124748 ||| || ||||| |||||||| ||||| || || |||||| | ||| Sbjct 8721 AACTCTATCGGATTACAATATTCAGAAAGAGTCCACGTTGCATCTTGTT 8673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755245076684800