Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq259 93.3 4e-14 seq2467 84.2 2e-11 >seq259 Length=51451 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 139623 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTT 139682 |||| ||| | || | || |||||||||||||| || ||||||||||| ||| | || Sbjct 12539 TACCTGCAAATATTAAGCGCTGCTGATCGGGAGGGATTCCTTCTTTGTCT-TGAATCTTG 12481 Query 139683 GTTTTAGCTGTTCCACTG-TGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 | ||| | || || || | || | ||||| || |||| ||| | ||||||||||||| Sbjct 12480 GCTTTCACGTTTTCAATGGTATCAGATGGCTCAACTTCAAGGGTAATCGTCTTGCCGGTC 12421 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | ||||| |||||||| ||||| Sbjct 12420 AGGGTTTTGACGAATATCTGCAT 12398 Score = 82.4 bits (90), Expect = 8e-11 Identities = 105/142 (74%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 139624 ACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG 139683 ||||||| | || || || || ||||| || || ||||| |||||||| ||| | |||| Sbjct 13097 ACCAGCAAATATTAGTCGCTGTTGATCAGGTGGAATGCCCTCTTTGTCC-TGAATCTTTG 13039 Query 139684 TTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCA 139742 || | | ||| | |||||| | ||||| ||||| | || | |||||||| || | Sbjct 13038 CCTTCACGTTTTCGATTGTGTCAGACGGCTCGACCTCCAATGTTATAGTCTTGCCAGTAA 12979 Query 139743 ACGTTTTTACGAATATTTGCAT 139764 ||||| |||||||||||||| Sbjct 12978 GAGTTTTAACGAATATTTGCAT 12957 >seq2467 Length=23714 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/143 (74%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 139623 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTT 139682 |||| ||| | |||| || || ||||||||||| |||||||||||||| ||| |||| Sbjct 10840 TACCTGCAAAAATCAAGCGCTGTTGATCGGGAGGGATGCCTTCTTTGTC-TTGAATTTTC 10898 Query 139683 G-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 | |||| | ||| | ||||| | || ||||| || | || | || || || ||| Sbjct 10899 GCCTTTACGTTTTCGATCGTGTCAGAAGGTTCCACTTCTAACGTAATTGTTTTACCCGTC 10958 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 ||||| |||||||| || ||||| Sbjct 10959 AACGTCTTTACGAAGATCTGCAT 10981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495925498931200