Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5314 98.7 1e-15 seq4487 84.2 3e-11 >seq5314 Length=14302 Score = 98.7 bits (108), Expect = 1e-15 Identities = 211/309 (68%), Gaps = 11/309 (4%) Strand=Plus/Minus Query 49996 ATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATG 50055 || ||||||||| ||||| | || ||||| || ||||| || || | ||||||||| Sbjct 5689 ATGAGTTCGTTGCTGAACGTTAAACCCGGCATAAGACCACGTTTCTTCAACCAAAATATA 5630 Query 50056 GACGCAAA--TGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCT 50113 | ||| || || | | ||||| || | ||||| || || | ||||||||||| | | Sbjct 5629 GCCGCGAAGCTGCCGCTGAAAAAAATA--CCTTCGACGGCAGAGAAGGCAACAAGGCGTT 5572 Query 50114 CTCCATAA-CTGGCGCTGT--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTA 50170 | || || || || | | | || ||||| | ||||| || || ||||| || | Sbjct 5571 CAGCAAAAGGTGTCGATTTCCCGTGGATCCATCTCAACGCCCAGTCTGCTTTCTTCTTCA 5512 Query 50171 CACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACAT 50230 |||| |||| |||||| | ||| || || || | | ||| | | ||| | | Sbjct 5511 CACACGGCAGCGTTTCGACGGCGTTGAACAGCAACTCCCTTTGAGCGGGGTTTTTGATGT 5452 Query 50231 AAGTATCGATCA--AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAA 50288 ||| |||||| | || || |||||| || ||||| || ||||| | || |||||||| Sbjct 5451 AAGCATCGATAAGTAACGA--ATACATCTCAGAATGTATATTTTCCAGTGCAATCTGAAA 5394 Query 50289 TCCGTAGAA 50297 ||||| || Sbjct 5393 GCCGTAAAA 5385 >seq4487 Length=16325 Score = 84.2 bits (92), Expect = 3e-11 Identities = 160/235 (68%), Gaps = 3/235 (1%) Strand=Plus/Minus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| || || || |||||| ||||| |||| || | || || || || || || | Sbjct 3470 TCCAACCATAAAAGTGCATAGACGTTATTTTGCCGTAGTTAGGTTCCGCGATGTGTATGT 3411 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 ||| || || || || | |||||| || || || ||||||| | || | |||| Sbjct 3410 TCAGCGACTGCGACTGGTCAACGAAGGCCCCTCTATCGACAGCCATATCGATTACGGTCT 3351 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG---TTTG 78961 | || | ||||||||||| |||||| || | | ||||| | || ||| | | | Sbjct 3350 TCTGCGAAATTTCCCAAACAGTTTTGTACAATTTTTTAATGTGTTTTGGTATGGAATCGA 3291 Query 78962 TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCA 79016 | |||||||| ||||| || | || |||||| ||| || || | ||| ||||| Sbjct 3290 TGTTCTGAATTGATCCTCCGTTCGCAATAATCTCATTTTTCATATTTTCGTTCCA 3236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718068259351040