Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12]
22,336 sequences; 218,332,512 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq5314 98.7 1e-15
seq4487 84.2 3e-11
>seq5314
Length=14302
Score = 98.7 bits (108), Expect = 1e-15
Identities = 211/309 (68%), Gaps = 11/309 (4%)
Strand=Plus/Minus
Query 49996 ATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATG 50055
|| ||||||||| ||||| | || ||||| || ||||| || || | |||||||||
Sbjct 5689 ATGAGTTCGTTGCTGAACGTTAAACCCGGCATAAGACCACGTTTCTTCAACCAAAATATA 5630
Query 50056 GACGCAAA--TGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCT 50113
| ||| || || | | ||||| || | ||||| || || | ||||||||||| | |
Sbjct 5629 GCCGCGAAGCTGCCGCTGAAAAAAATA--CCTTCGACGGCAGAGAAGGCAACAAGGCGTT 5572
Query 50114 CTCCATAA-CTGGCGCTGT--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTA 50170
| || || || || | | | || ||||| | ||||| || || ||||| || |
Sbjct 5571 CAGCAAAAGGTGTCGATTTCCCGTGGATCCATCTCAACGCCCAGTCTGCTTTCTTCTTCA 5512
Query 50171 CACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACAT 50230
|||| |||| |||||| | ||| || || || | | ||| | | ||| | |
Sbjct 5511 CACACGGCAGCGTTTCGACGGCGTTGAACAGCAACTCCCTTTGAGCGGGGTTTTTGATGT 5452
Query 50231 AAGTATCGATCA--AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAA 50288
||| |||||| | || || |||||| || ||||| || ||||| | || ||||||||
Sbjct 5451 AAGCATCGATAAGTAACGA--ATACATCTCAGAATGTATATTTTCCAGTGCAATCTGAAA 5394
Query 50289 TCCGTAGAA 50297
||||| ||
Sbjct 5393 GCCGTAAAA 5385
>seq4487
Length=16325
Score = 84.2 bits (92), Expect = 3e-11
Identities = 160/235 (68%), Gaps = 3/235 (1%)
Strand=Plus/Minus
Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844
|||| || || || |||||| ||||| |||| || | || || || || || || |
Sbjct 3470 TCCAACCATAAAAGTGCATAGACGTTATTTTGCCGTAGTTAGGTTCCGCGATGTGTATGT 3411
Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904
||| || || || || | |||||| || || || ||||||| | || | ||||
Sbjct 3410 TCAGCGACTGCGACTGGTCAACGAAGGCCCCTCTATCGACAGCCATATCGATTACGGTCT 3351
Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG---TTTG 78961
| || | ||||||||||| |||||| || | | ||||| | || ||| | | |
Sbjct 3350 TCTGCGAAATTTCCCAAACAGTTTTGTACAATTTTTTAATGTGTTTTGGTATGGAATCGA 3291
Query 78962 TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCA 79016
| |||||||| ||||| || | || |||||| ||| || || | ||| |||||
Sbjct 3290 TGTTCTGAATTGATCCTCCGTTCGCAATAATCTCATTTTTCATATTTTCGTTCCA 3236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718068259351040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |