Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq2467 104 2e-17 seq259 89.7 5e-13 >seq2467 Length=23714 Score = 104 bits (114), Expect = 2e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 143043 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTT 143102 |||| ||| | |||| ||||||||||| |||||||| ||||||||||| ||| || Sbjct 9988 TACCGGCAAAAATCAATCGTTGCTGATCCGGAGGTATCCCTTCTTTGTCCTGAATCTTCG 10047 Query 143103 GTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCA 143162 ||| | | ||| | |||||||| ||||| ||||| | ||| | || || || |||| Sbjct 10048 CTTTAACATTTTCAATCGTGTCCGATGGTTCAACTTCCAAAGTAATAGTTTTTCCAGTCA 10107 Query 143163 ATGTTTTTACGAATATTTGCAT 143184 |||| || |||||||| ||||| Sbjct 10108 ATGTCTTGACGAATATCTGCAT 10129 Score = 89.7 bits (98), Expect = 5e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 143043 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTT 143102 |||| ||| | |||| || || ||||||||||| |||||||||||||| |||||| Sbjct 10840 TACCTGCAAAAATCAAGCGCTGTTGATCGGGAGGGATGCCTTCTTTGTCTTGAATTTTCG 10899 Query 143103 GTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCA 143162 |||| | ||| | |||||| | ||||| ||||| | || | || || || |||| Sbjct 10900 CCTTTACGTTTTCGATCGTGTCAGAAGGTTCCACTTCTAACGTAATTGTTTTACCCGTCA 10959 Query 143163 ATGTTTTTACGAATATTTGCAT 143184 | || |||||||| || ||||| Sbjct 10960 ACGTCTTTACGAAGATCTGCAT 10981 >seq259 Length=51451 Score = 89.7 bits (98), Expect = 5e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 143043 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTT 143102 |||| ||| | || | || |||||||||||||| || ||||||||||| ||| || Sbjct 12539 TACCTGCAAATATTAAGCGCTGCTGATCGGGAGGGATTCCTTCTTTGTCTTGAATCTTGG 12480 Query 143103 GTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCA 143162 ||| | | ||| | || || | || || ||||||| || | |||||||||||||| Sbjct 12479 CTTTCACGTTTTCAATGGTATCAGATGGCTCAACTTCAAGGGTAATCGTCTTGCCGGTCA 12420 Query 143163 ATGTTTTTACGAATATTTGCAT 143184 ||||| |||||||| ||||| Sbjct 12419 GGGTTTTGACGAATATCTGCAT 12398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506872841579520