Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq259 86.0 5e-12 seq2467 82.4 6e-11 >seq259 Length=51451 Score = 86.0 bits (94), Expect = 5e-12 Identities = 96/126 (76%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 15239 CGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTAT 15297 ||||| || || ||||||||||||||| || ||| |||||| || ||| |||| || Sbjct 12229 CGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATCTTTGCT-TTAACATTTTCAAT 12171 Query 15298 GGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAAT 15357 |||||| | || || ||||| || || ||||| ||||| || || ||||| ||||| Sbjct 12170 GGTATCTGAAGGCTCGACTTCTAAAGTGATCGTTTTGCCTGTGAGGGTCTTTACGAAAAT 12111 Query 15358 TTGCAT 15363 |||||| Sbjct 12110 TTGCAT 12105 >seq2467 Length=23714 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 15233 ATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATT 15292 ||||| || ||||| ||| || || ||||||||||| |||||| |||||| || Sbjct 10851 ATCAAGCGCTGTTGATCGGGAGGGATGCCTTCTTTGTCTTGAATTTTCGCCTTTACGTTT 10910 Query 15293 TCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACA 15352 || || || || | ||| || ||||| ||||| |||||||| |||| || ||||| Sbjct 10911 TCGATCGTGTCAGAAGGTTCCACTTCTAACGTAATTGTTTTACCCGTCAACGTCTTTACG 10970 Query 15353 AAAATTTGCATATTT 15367 || || ||||| ||| Sbjct 10971 AAGATCTGCATTTTT 10985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362080607578176