Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq259 123 6e-23 seq4831 113 1e-19 seq2467 111 4e-19 seq1945 89.7 1e-12 >seq259 Length=51451 Score = 123 bits (136), Expect = 6e-23 Identities = 112/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 |||||||| ||||| | |||||||||||| || || || ||||| |||||||||||||| Sbjct 13096 CCAGCAAATATTAGTCGCTGTTGATCAGGTGGAATGCCCTCTTTGTCCTGAATCTTTGCC 13037 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 || || ||||| | || || || || ||||| | ||| |||||||| |||||||| Sbjct 13036 TTCACGTTTTCGATTGTGTCAGACGGCTCGACCTCCAATGTTATAGTCTTGCCAGTAAGA 12977 Query 104540 GTTTTTACAAATATCTGCATT 104560 ||||| || ||||| |||||| Sbjct 12976 GTTTTAACGAATATTTGCATT 12956 Score = 122 bits (134), Expect = 2e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 ||||||||||| || | || |||||||| || ||||||||||||||||||||||||||| Sbjct 12244 CCAGCAAAAATAAGTCGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATCTTTGCT 12185 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 || |||||||| | |||||| ||| || || |||| || || || || || || || Sbjct 12184 TTAACATTTTCAATGGTATCTGAAGGCTCGACTTCTAAAGTGATCGTTTTGCCTGTGAGG 12125 Query 104540 GTTTTTACAAATATCTGCAT 104559 || ||||| || || ||||| Sbjct 12124 GTCTTTACGAAAATTTGCAT 12105 Score = 116 bits (128), Expect = 9e-21 Identities = 118/153 (77%), Gaps = 3/153 (2%) Strand=Plus/Minus Query 104411 AGTTGTT---TTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 ||||||| | || |||||||| || ||||||||||| ||||| || |||||||||||| Sbjct 12827 AGTTGTTCCTTACCTGCAAAAATAAGTCTCTGTTGATCCGGAGGAATCCCTTCTTTATCC 12768 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || || |||||||| | || || | ||| || || | ||||| ||| Sbjct 12767 TGAATCTTCGCCTTAACATTTTCAATCGTGTCCGATGCTTCAACTTCCAAGGTAATTGTC 12708 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || ||||| || || ||||| || |||||| Sbjct 12707 TTGCCTGTAAGCGTCTTGACAAAAATTTGCATT 12675 Score = 114 bits (126), Expect = 3e-20 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 || ||||| |||| ||||| |||||||| || |||||||||||||||||||| |||||| Sbjct 11392 CCTGCAAAGATTAATCTCTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATTTTTGCT 11333 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| ||||| | ||||| || || ||||| | || || || ||||| || | Sbjct 11332 TTTACGTTTTCGATCGTATCAGATGGCTCGACCTCCAAAGTTATTGTTTTACCCGTCAAG 11273 Query 104540 GTTTTTACAAATATCTGCATT 104560 ||||| || || ||||||||| Sbjct 11272 GTTTTGACGAAAATCTGCATT 11252 Score = 113 bits (124), Expect = 1e-19 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 || ||||| |||| | ||| ||||| ||||| ||||||||||| || |||||||| ||| Sbjct 12537 CCTGCAAATATTAAGCGCTGCTGATCGGGAGGGATTCCTTCTTTGTCTTGAATCTTGGCT 12478 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 || || ||||| | |||||| || || || || || ||||| ||||| || || || Sbjct 12477 TTCACGTTTTCAATGGTATCAGATGGCTCAACTTCAAGGGTAATCGTCTTGCCGGTCAGG 12418 Query 104540 GTTTTTACAAATATCTGCAT 104559 ||||| || ||||||||||| Sbjct 12417 GTTTTGACGAATATCTGCAT 12398 >seq4831 Length=15448 Score = 113 bits (124), Expect = 1e-19 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 104344 CCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACC 104403 |||||| || ||||| || || || |||||||||||||| || || |||||||||| || Sbjct 8667 CCTAAGAACAAGATGCAACGTGGACTCTTTCTGAATATTGTAATCCGATAGAGTTCGGCC 8726 Query 104404 GTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCT 104458 ||||||| |||||||| |||||||| | ||||| |||||||| || |||||| Sbjct 8727 ATCTTCTAACTGTTTTCCGGCAAAAATCAATCTCTGCTGATCAGGTGGAATTCCT 8781 >seq2467 Length=23714 Score = 111 bits (122), Expect = 4e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 ||||| || || | ||||||||||||||| || || || || || || ||||| || || Sbjct 9135 CCAGCGAATATCAACCTCTGTTGATCAGGTGGAATGCCCTCCTTGTCTTGAATTTTAGCC 9194 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| ||||| | ||||| || |||||||| | ||||||||||| || || || Sbjct 9195 TTTACGTTTTCAATTGTATCCGACGGCTCTACCTCCAACGTAATAGTCTTGCCGGTGAGC 9254 Query 104540 GTTTTTACAAATATCTGCATT 104560 ||||| |||||||| |||||| Sbjct 9255 GTTTTGACAAATATTTGCATT 9275 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 || || ||||||| | ||||||||||||||| ||||||||||| || ||||||||||| Sbjct 9414 CCTGCGAAAATTAAGCGCTGTTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCC 9473 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 || || ||||||| ||||| ||||| || || || || || ||||| || || || Sbjct 9474 TTAACGTTTTCTATCGTATCAGATGGTTCCACTTCAAGCGTTATCGTCTTGCCCGTGAGG 9533 Query 104540 GTTTTTACAAATATCTGCAT 104559 || || || || || ||||| Sbjct 9534 GTCTTCACGAAAATTTGCAT 9553 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 || |||||||| | | || ||||| |||||||| |||||||| ||||||||||| ||| Sbjct 9990 CCGGCAAAAATCAATCGTTGCTGATCCGGAGGTATCCCTTCTTTGTCCTGAATCTTCGCT 10049 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 || |||||||| | || || ||||| || || | |||||||| || ||||| | | Sbjct 10050 TTAACATTTTCAATCGTGTCCGATGGTTCAACTTCCAAAGTAATAGTTTTTCCAGTCAAT 10109 Query 104540 GTTTTTACAAATATCTGCAT 104559 || || || ||||||||||| Sbjct 10110 GTCTTGACGAATATCTGCAT 10129 Score = 105 bits (116), Expect = 2e-17 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 || |||||||| | | ||||||||| ||||| || |||||||| || ||||| || || Sbjct 10842 CCTGCAAAAATCAAGCGCTGTTGATCGGGAGGGATGCCTTCTTTGTCTTGAATTTTCGCC 10901 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 ||||| ||||| | || || |||||| || |||| ||||| || ||||| || | Sbjct 10902 TTTACGTTTTCGATCGTGTCAGAAGGTTCCACTTCTAACGTAATTGTTTTACCCGTCAAC 10961 Query 104540 GTTTTTACAAATATCTGCATTTT 104562 || ||||| || ||||||||||| Sbjct 10962 GTCTTTACGAAGATCTGCATTTT 10984 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 || || ||||| | | ||| ||||| ||||| || || |||||||||||||| || || Sbjct 10268 CCTGCGAAAATCAATCGCTGCTGATCCGGAGGAATCCCCTCTTTATCCTGAATTTTAGCC 10327 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 || |||||||| | || || ||||| || || | |||||||| || || || | Sbjct 10328 TTAACATTTTCAATCGTGTCCGACGGTTCAACTTCCAACGTAATAGTTTTGCCCGTTAAC 10387 Query 104540 GTTTTTACAAATATCTGCATT 104560 ||||| ||||| ||||||||| Sbjct 10388 GTTTTGACAAAAATCTGCATT 10408 Score = 91.5 bits (100), Expect = 3e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || || || || |||| | ||| |||||||| || ||||||||||| ||||| ||||| Sbjct 10548 TTGCCTGCGAAGATTAAGCGCTGCTGATCAGGTGGGATTCCTTCTTTGTCCTGGATCTTG 10607 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 || || || ||||| | ||||| || || || || | ||||| ||||| || || Sbjct 10608 GCCTTGACGTTTTCGATCGTATCAGACGGCTCAACTTCCAAAGTAATCGTCTTTCCGGTC 10667 Query 104537 AGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || |||||||| Sbjct 10668 AGAGTTTTAACGAAGATCTGCAT 10690 Score = 86.0 bits (94), Expect = 1e-11 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 |||| || || ||||||||||| | || || |||||||| || || || || || || Sbjct 9696 TCTATTTAATTACCAGCAAAAATCAATCTTTGCTGATCAGGGGGAATGCCCTCCTTGTCT 9755 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || || || ||||| |||||||| | || || || || ||||| || || ||||| Sbjct 9756 TGTATTTTAGCTTTAACATTTTCAATTGTGTCTGACGGCTCGACCTCCAGCGTGATAGTT 9815 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || | ||||| ||||| || ||||| Sbjct 9816 TTTCCCGTTAAAGTTTTGACAAAAATTTGCAT 9847 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| |||| || || ||||| || ||| ||||||||||||||||||||| Sbjct 9846 ATCCCGCCTCGAAGCCGCAGAACCAGATGCAACGTACTCTCTTTCTGAATATTATAGTCA 9905 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTT 104418 || |||||||| ||||| || |||||||| Sbjct 9906 GAGAGAGTTCTGCCGTCCTCAAGTTGTTT 9934 >seq1945 Length=26447 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||||||||| ||||| || | || |||||||| | ||||| ||| |||||| Sbjct 13464 ATACCTTCTTTATCTTGAATTTTGGACTTCACATTTTCGATCGTATCTGAAGGCTCTACC 13523 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| |||||||| || || || || ||||| || ||||||||||| Sbjct 13524 TCTAACGTAATAGTTTTGCCGGTTAGCGTTTTCACGAATATCTGCAT 13570 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 |||||||||||||||| ||||| || || | || |||||||| || || |||||||||| Sbjct 13304 CTTTCTGAATATTATAATCAGAAAGCGTGCGTCCATCTTCTAGCTGCTTGCCAGCAAAAA 13363 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCT 104458 | || | ||| || || ||||| |||||| Sbjct 13364 TCAGTCGCTGCTGGTCGGGAGGAATTCCT 13392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151068892805888