Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq259 96.9 3e-15 seq2467 87.8 2e-12 >seq259 Length=51451 Score = 96.9 bits (106), Expect = 3e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 94872 CAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGA 94931 ||||||||| || |||||||||||||||||| || |||||||| | |||||| || |||| Sbjct 11955 CAAAGATTAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAATTTTGGCTTTGA 11896 Query 94932 CGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTT 94991 | | | || || | | || || || | || || || ||||| ||||| |||| Sbjct 11895 CATTTTCAATCGTATCTGATGGCTCTACCTCCAAAGTTATAGTCTTTCCTGTAAGGGTTT 11836 Query 94992 TCACAAAGATCTGCATGC 95009 | ||||| |||||||||| Sbjct 11835 TGACAAAAATCTGCATGC 11818 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 94872 CAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGA 94931 |||| || || | |||||||| || |||||||| |||||||| | |||||| ||||| | Sbjct 9763 CAAATATCAAGCGCTGCTGATCCGGCGGAATACCCTCTTTGTCTTGAATTTTCGCCTTCA 9704 Query 94932 CGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTT 94991 || | | || |||| | || || || | ||||| ||||||||||| | |||| Sbjct 9703 CGTTCTCAATTGTATCAGAAGGTTCTACTTCCAATGTGATCGTTTTTCCAGTCAACGTTT 9644 Query 94992 TCACAAAGATCTGCATGCTTACAA 95015 | || ||||| |||||| |||||| Sbjct 9643 TGACGAAGATTTGCATGATTACAA 9620 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 94872 CAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGA 94931 ||||||||||||| |||||||| || ||||| |||||||| || | ||||||||| || | Sbjct 11388 CAAAGATTAATCTCTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATTTTTGCTTTTA 11329 Query 94932 CGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTT 94991 || ||| || |||| | ||||| || | || || ||||| || || | |||| Sbjct 11328 CGTTTTCGATCGTATCAGATGGCTCGACCTCCAAAGTTATTGTTTTACCCGTCAAGGTTT 11269 Query 94992 TCACAAAGATCTGCAT 95007 | || || |||||||| Sbjct 11268 TGACGAAAATCTGCAT 11253 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 94872 CAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGA 94931 |||| |||| || || ||||| || ||||| || |||||||| | ||| |||||||| | Sbjct 13092 CAAATATTAGTCGCTGTTGATCAGGTGGAATGCCCTCTTTGTCCTGAATCTTTGCCTTCA 13033 Query 94932 CGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTT 94991 || ||| ||||||| | ||||| || | || || || || ||||||||||||| Sbjct 13032 CGTTTTCGATTGTGTCAGACGGCTCGACCTCCAATGTTATAGTCTTGCCAGTAAGAGTTT 12973 Query 94992 TCACAAAGATCTGCAT 95007 | || || || ||||| Sbjct 12972 TAACGAATATTTGCAT 12957 >seq2467 Length=23714 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 94874 AAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACG 94933 |||||||| | |||||||| || || || ||||||||||| | || || ||||||||| Sbjct 10557 AAGATTAAGCGCTGCTGATCAGGTGGGATTCCTTCTTTGTCCTGGATCTTGGCCTTGACG 10616 Query 94934 GCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTC 94993 ||| || |||| | || || || | || || || ||||| || |||||||| Sbjct 10617 TTTTCGATCGTATCAGACGGCTCAACTTCCAAAGTAATCGTCTTTCCGGTCAGAGTTTTA 10676 Query 94994 ACAAAGATCTGCATGC 95009 || ||||||||||||| Sbjct 10677 ACGAAGATCTGCATGC 10692 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 94872 CAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGA 94931 |||| || |||||||||||||| || ||||| || || ||||| | ||||| || || | Sbjct 9712 CAAAAATCAATCTTTGCTGATCAGGGGGAATGCCCTCCTTGTCTTGTATTTTAGCTTTAA 9771 Query 94932 CGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTT 94991 | | | ||||| | | ||||| || | |||||| |||||||| || | ||||| Sbjct 9772 CATTTTCAATTGTGTCTGACGGCTCGACCTCCAGCGTGATAGTTTTTCCCGTTAAAGTTT 9831 Query 94992 TCACAAAGATCTGCAT 95007 | ||||| || ||||| Sbjct 9832 TGACAAAAATTTGCAT 9847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448166037096960