Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1026 185 1e-42 seq1850 167 4e-37 >seq1026 Length=34382 Score = 185 bits (204), Expect = 1e-42 Identities = 205/270 (76%), Gaps = 4/270 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||||||||||| | ||| || || |||||||| ||||| || ||||| || || Sbjct 15729 CGCCAAGCGTCATCGCAAAGTTCTCCGTGACAACATCCAGGGAATAACGAAGCCGGCCAT 15670 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||| ||||| | |||||||||||||| || || ||| || | || ||||||| Sbjct 15669 TCGACGTTTGGCTAGACGTGGTGGAGTCAAACGAATCAGTGGCCTGATATACGAAGAGAC 15610 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATAC--C 16609 ||||| ||||||||||| || || ||| || |||| |||||| | |||| ||| Sbjct 15609 TCGTGGCGTTTTGAAGATATTTCTTGAGAATGTAATCCGTGATGCGGT-CACT-TACTGT 15552 Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669 || ||||| || || ||||| || || |||||||| |||||||||| ||||| || ||| Sbjct 15551 GAACACGCCAAGCGGAAGACCGTTACAGCCATGGATGTCGTCTATGCGTTGAAGCGACAA 15492 Query 16670 GGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 || |||| | || |||||||| ||||| Sbjct 15491 GGTCGTACTTTGTACGGTTTTGGCGGTTAA 15462 >seq1850 Length=27094 Score = 167 bits (184), Expect = 4e-37 Identities = 199/270 (74%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | ||| || || ||||| |||||||| || ||||| || || Sbjct 11987 GCGAAGCGTCATCGCAAAGTTCTGCGCGACAACATTCAAGGAATAACAAAGCCGGCGATA 12046 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||| | || | |||||||| || || || || || ||| |||| || || | | Sbjct 12047 CGGCGTTTAGCCAGACGTGGTGGCGTGAAACGAATCAGCGGCTTGATCTACGAGGAAACT 12106 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| |||| |||| || ||| | ||| ||| |||| ||| || || || ||| Sbjct 12107 CGTGGTGTTCTGAAAATATTCTTGGAGAACGTCATCCGTGACGCCGTCACGTACTGCGAA 12166 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || || ||||| ||||| ||||| | |||||| |||| |||||||||||||||||||| Sbjct 12167 CATGCGAAACGGAAGACGGTCACTGCGATGGATGTCGTATATGCATTGAAACGTCAAGGA 12226 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 || | | |||| ||||| || ||||| || Sbjct 12227 CGCACGCTTTACGGTTTCGGCGGTTAAACT 12256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79054778038848