Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2467 100 3e-16 seq4487 89.7 5e-13 >seq2467 Length=23714 Score = 100 bits (110), Expect = 3e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 131091 CTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTT 131150 |||||||||| ||||||| |||||||| || || ||||||||||||||||| ||| || Sbjct 10547 CTTGCCTGCGAAGATTAAGCGCTGCTGATCAGGTGGGATTCCTTCTTTGTCCTGGATCTT 10606 Query 131151 CTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 ||||| | || | ||||| | | ||| | || | |||| || || ||||| Sbjct 10607 GGCCTTGACGTTTTCGATCGTATCAGACGGCTCAACTTCCAAAGTAATCGTCTTTCCGGT 10666 Query 131211 TAGAGTTTTTACGAAAATCTGCATG 131235 |||||||| ||||| ||||||||| Sbjct 10667 CAGAGTTTTAACGAAGATCTGCATG 10691 >seq4487 Length=16325 Score = 89.7 bits (98), Expect = 5e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 145064 ACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGTTCAAAA 145123 |||||||||||||| | | |||||||| |||||||||||||||| ||| ||| | Sbjct 3136 ACCTGAAACTCGCCTGAAAGGACACGACGACTATACACGTTAGACGTGTAGGCTTCGATC 3077 Query 145124 GACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCAT 145167 || |||||||| |||| || |||||||| | ||| || ||||| Sbjct 3076 GATTCGTTATTTCCCAAAATCTGAGCGGTAGATGCCGTTGGCAT 3033 Score = 82.4 bits (90), Expect = 7e-11 Identities = 181/266 (68%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 145217 TTTAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAA 145276 || |||| | ||| ||||| || || || |||| | |||||||||||||||||| Sbjct 2934 TTCAGCGCAGACCAGTCCCAAAGATCGGTAGGAATCACATTCCACATGTCGTACTGCAAG 2875 Query 145277 ATGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTT-GGCGAG 145335 || |||| |||| | || | |||||| | | || || | || || |||| ||| | Sbjct 2874 ATTCCCTTGCTGACAGGACACCCTTGATACGTTTCGT-ACGGTCCAAACTTTTCGGCCAA 2816 Query 145336 CTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAG 145395 || || || || |||| ||| || ||| || || || ||| || | ||| ||||| Sbjct 2815 TTCACAGCTGGCTTCCAAAGCAGCGTGATAGATCGTTTCAAAAATCTGTCGGTTAAGCAG 2756 Query 145396 CATCGCTTCATCGCTCTCGTACGGCAT-GCGCAGCAGTACAAAAGCATCGGCGAGCCCCT 145454 ||||| | |||| || ||| ||||| || | ||| |||||||| ||||||| Sbjct 2755 GGCTGCTTCTTTTGACTCGAAC-TCATAGCGCATAAGAATAAAGGCATCGGCCAGCCCCT 2697 Query 145455 GTATTCCCACGCCGATGGGCCGATGT 145480 | | || | || || || |||||| Sbjct 2696 GAACACCTATTCCTATTGGTCGATGT 2671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471881014026240