Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq20521 118 7e-22 seq368 118 7e-22 seq3143 109 4e-19 seq2467 107 1e-18 seq4367 104 2e-17 seq9229 91.5 1e-13 seq259 84.2 1e-11 >seq20521 Length=651 Score = 118 bits (130), Expect = 7e-22 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG--GTAA---TCTCGT 25956 ||| |||||||||||||||| |||||||||||||||| |||||| |||| |||||| Sbjct 107 AAGACCGTTCCCTTGGCTGTTGTTTCGCTAGATAGTAAATAGGGACAGTAAGAATCTCGT 48 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 47 TGATCCATTCATGCGCGTCACTAATTAGATGACGA 13 >seq368 Length=47270 Score = 118 bits (130), Expect = 7e-22 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG--GTAA---TCTCGT 25956 ||| |||||||||||||||| |||||||||||||||| |||||| |||| |||||| Sbjct 21274 AAGACCGTTCCCTTGGCTGTTGTTTCGCTAGATAGTAAATAGGGACAGTAAGAATCTCGT 21333 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 21334 TGATCCATTCATGCGCGTCACTAATTAGATGACGA 21368 >seq3143 Length=20763 Score = 109 bits (120), Expect = 4e-19 Identities = 79/90 (88%), Gaps = 5/90 (6%) Strand=Plus/Minus Query 25907 CGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTAA---TCTCGTTAATC 25961 |||||| |||||||| |||||||||||||||| |||||| ||||| ||||||| || Sbjct 6534 CGTTCCTTTGGCTGTTGTTTCGCTAGATAGTAAATAGGGACGGTAAGAATCTCGTTGATT 6475 Query 25962 CTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||||||||||||||||||||||||||| Sbjct 6474 CATTCATGCGCGTCACTAATTAGATGACGA 6445 >seq2467 Length=23714 Score = 107 bits (118), Expect = 1e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 38178 CCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGC 38237 || ||||| || | ||| |||||||||| |||| |||||||||||| |||||| | Sbjct 10842 CCTGCAAAAATCAAGCGCTGTTGATCGGGAGGGATGCCTTCTTTGTCTTGAATTTTCGCC 10901 Query 38238 TTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAG 38297 || || || | || || || | ||| |||||||| ||||| |||||||||||||| Sbjct 10902 TTTACGTTTTCGATCGTGTCAGAAGGTTCCACTTCTAACGTAATTGTTTTACCCGTCAAC 10961 Query 38298 GTTTTCACGAATATCTGCATGTTTTAC 38324 || || ||||| |||||||| ||| || Sbjct 10962 GTCTTTACGAAGATCTGCATTTTTCAC 10988 Score = 84.2 bits (92), Expect = 1e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 38178 CCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGC 38237 |||||||| || | ||||| ||||| | || | |||||||||||| ||| || Sbjct 9990 CCGGCAAAAATCAATCGTTGCTGATCCGGAGGTATCCCTTCTTTGTCCTGAATCTTCGCT 10049 Query 38238 TTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAG 38297 || ||||| | | || || ||||||||| || ||||||||||| || ||||| Sbjct 10050 TTAACATTTTCAATCGTGTCCGATGGTTCAACTTCCAAAGTAATAGTTTTTCCAGTCAAT 10109 Query 38298 GTTTTCACGAATATCTGCATG 38318 || || ||||||||||||||| Sbjct 10110 GTCTTGACGAATATCTGCATG 10130 >seq4367 Length=16626 Score = 104 bits (114), Expect = 2e-17 Identities = 81/95 (85%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGT---AATCTCGT 25956 ||| |||||||||||||||| |||||||||| ||||| |||||| || |||||||| Sbjct 15538 AAGACCGTTCCCTTGGCTGTTGTTTCGCTAGGTAGTAAATAGGGACAGTAAGAATCTCGT 15479 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||||||| | |||||||||||||| Sbjct 15478 TGATCCATTCATGCGCGTGATTAATTAGATGACGA 15444 >seq9229 Length=7805 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/167 (72%), Gaps = 6/167 (4%) Strand=Plus/Plus Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 || || |||||||| || ||||||||||| |||||||||||||||||| |||||||| Sbjct 7070 CCCACTAAATATTTTGGCTGCGAACTTGGAGCTCAGACGCAGTTTGATTTGAAAAACGAT 7129 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCC---AAGCTGCAGGACTTACTTGACGGC 6437 || | ||| || ||||| | | || |||| || |||||||| | | ||||| Sbjct 7130 CGATACATTGTGAACGG---GGAGCACGATGCCCAGAAACTGCAGGAAATTTTGGACGGA 7186 Query 6438 TTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGAC 6484 || || |||||||| || || |||||||| || || || || Sbjct 7187 TTCATCAAAAAGTTTGTTCTCTGCGCCGAATGCGAAAATCCTGAAAC 7233 >seq259 Length=51451 Score = 84.2 bits (92), Expect = 1e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 38178 CCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGC 38237 || |||||||||| ||| || ||||||| |||| ||||||||||| ||| || Sbjct 12537 CCTGCAAATATTAAGCGCTGCTGATCGGGAGGGATTCCTTCTTTGTCTTGAATCTTGGCT 12478 Query 38238 TTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAG 38297 ||||| || | | ||||| |||||||| | ||||| || || || |||| | Sbjct 12477 TTCACGTTTTCAATGGTATCAGATGGCTCAACTTCAAGGGTAATCGTCTTGCCGGTCAGG 12418 Query 38298 GTTTTCACGAATATCTGCATG 38318 ||||| ||||||||||||||| Sbjct 12417 GTTTTGACGAATATCTGCATG 12397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334856020673216