Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12]
22,336 sequences; 218,332,512 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq4831 95.1 1e-14
seq2467 95.1 1e-14
seq259 91.5 1e-13
>seq4831
Length=15448
Score = 95.1 bits (104), Expect = 1e-14
Identities = 90/115 (78%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159
||| ||||||||||| || ||| | | ||||||||||| ||||| |||||||||| ||
Sbjct 8781 AGGAATTCCACCTGATCAGCAGAGATTGATTTTTGCCGGAAAACAGTTAGAAGATGGCCG 8722
Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGG 25214
||| | |||||||||||||| ||||| |||||| | ||| | || || |||
Sbjct 8721 AACTCTATCGGATTACAATATTCAGAAAGAGTCCACGTTGCATCTTGTTCTTAGG 8667
>seq2467
Length=23714
Score = 95.1 bits (104), Expect = 1e-14
Identities = 110/146 (75%), Gaps = 2/146 (1%)
Strand=Plus/Minus
Query 24994 GAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053
||| |||||| || || |||||||| ||||| |||||| | || || | ||||||||
Sbjct 10986 GAAAAATGCAGATCTTCGTAAAGACGTTGACGGGTAAAACAATTACGTTAGAAGTGGAAC 10927
Query 25054 CGTCTGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112
| |||||||| ||||| | ||| | |||| ||| ||||||||||| || || ||
Sbjct 10926 CTTCTGACACGATCGAAAACGTAAAGGCGAAAATTCAA-GACAAAGAAGGCATCCCTCCC 10868
Query 25113 GACCAACAGCGGATTATTTTTGCCGG 25138
|| |||||||| | |||||||| ||
Sbjct 10867 GATCAACAGCGCTTGATTTTTGCAGG 10842
>seq259
Length=51451
Score = 91.5 bits (100), Expect = 1e-13
Identities = 107/142 (75%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||||||||| || || ||| | || || || | || ||| | || || ||| ||||
Sbjct 12956 AATGCAAATATTCGTTAAAACTCTTACTGGCAAGACTATAACATTGGAGGTCGAGCCGTC 13015
Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||| ||||| |||| ||||| | ||| |||||||| || ||||||||||| |
Sbjct 13016 TGACACAATCGAAAACGTGAAGGCAAAGATTCA-GGACAAAGAGGGCATTCCACCTGATC 13074
Query 25117 AACAGCGGATTATTTTTGCCGG 25138
||||||| | || ||||| ||
Sbjct 13075 AACAGCGACTAATATTTGCTGG 13096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433210039451840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |