Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq4831 95.1 1e-14 seq2467 95.1 1e-14 seq259 91.5 1e-13 >seq4831 Length=15448 Score = 95.1 bits (104), Expect = 1e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 ||| ||||||||||| || ||| | | ||||||||||| ||||| |||||||||| || Sbjct 8781 AGGAATTCCACCTGATCAGCAGAGATTGATTTTTGCCGGAAAACAGTTAGAAGATGGCCG 8722 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGG 25214 ||| | |||||||||||||| ||||| |||||| | ||| | || || ||| Sbjct 8721 AACTCTATCGGATTACAATATTCAGAAAGAGTCCACGTTGCATCTTGTTCTTAGG 8667 >seq2467 Length=23714 Score = 95.1 bits (104), Expect = 1e-14 Identities = 110/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 24994 GAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053 ||| |||||| || || |||||||| ||||| |||||| | || || | |||||||| Sbjct 10986 GAAAAATGCAGATCTTCGTAAAGACGTTGACGGGTAAAACAATTACGTTAGAAGTGGAAC 10927 Query 25054 CGTCTGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112 | |||||||| ||||| | ||| | |||| ||| ||||||||||| || || || Sbjct 10926 CTTCTGACACGATCGAAAACGTAAAGGCGAAAATTCAA-GACAAAGAAGGCATCCCTCCC 10868 Query 25113 GACCAACAGCGGATTATTTTTGCCGG 25138 || |||||||| | |||||||| || Sbjct 10867 GATCAACAGCGCTTGATTTTTGCAGG 10842 >seq259 Length=51451 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||||||||| || || ||| | || || || | || ||| | || || ||| |||| Sbjct 12956 AATGCAAATATTCGTTAAAACTCTTACTGGCAAGACTATAACATTGGAGGTCGAGCCGTC 13015 Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||| ||||| |||| ||||| | ||| |||||||| || ||||||||||| | Sbjct 13016 TGACACAATCGAAAACGTGAAGGCAAAGATTCA-GGACAAAGAGGGCATTCCACCTGATC 13074 Query 25117 AACAGCGGATTATTTTTGCCGG 25138 ||||||| | || ||||| || Sbjct 13075 AACAGCGACTAATATTTGCTGG 13096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433210039451840