Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq259 95.1 1e-14 seq2467 93.3 4e-14 >seq259 Length=51451 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 22211 TTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGG 22270 |||||| |||||||| || || ||||| || || || |||||| |||| | ||||| | Sbjct 9620 TTGTAATCATGCAAATCTTCGTCAAAACGTTGACTGGAAAAACGATCACATTGGAAGTAG 9679 Query 22271 AAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCAC 22330 || | | ||||| | || | | || |||||||||||||| ||||||||||| | Sbjct 9680 AACCTTCTGATACAATTGAGAACGTGAAGGCGAAAATTCAAGACAAAGAGGGTATTCCGC 9739 Query 22331 CCGATCAACAACGTCTTATATTTGCCGGCAAACAGTT 22367 | ||||| || || | |||||||| || | ||| || Sbjct 9740 CGGATCAGCAGCGCTTGATATTTGCAGGTATACAATT 9776 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || | || || |||||| ||||| | ||||| || | | Sbjct 12105 ATGCAAATTTTCGTAAAGACCCTCACAGGCAAAACGATCACTTTAGAAGTCGAGCCTTCA 12164 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | ||| ||| ||||| || || || || |||||||| ||||| Sbjct 12165 GATACCATTGAAAATGTTAAAGCAAAGATTCAGGATAAAGAAGGAATTCCACCTGATCAG 12224 Query 22339 CAACGTCTTATATTTGCCGG 22358 ||||| ||||| ||||| || Sbjct 12225 CAACGACTTATTTTTGCTGG 12244 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| | || || || || | ||| | || || || | | Sbjct 11820 ATGCAGATTTTTGTCAAAACCCTTACAGGAAAGACTATAACTTTGGAGGTAGAGCCATCA 11879 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || ||||| |||||||||||||| ||||| ||||| || ||||| Sbjct 11880 GATACGATTGAAAATGTCAAAGCCAAAATTCAAGACAAAGAGGGAATTCCTCCAGATCAG 11939 Query 22339 CAACGTCTTATATTTGCCGG 22358 ||||| || || ||||| || Sbjct 11940 CAACGACTAATCTTTGCTGG 11959 >seq2467 Length=23714 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 ||||||||||||||| ||||||||||| || ||||| |||| || || || || | | Sbjct 9848 GATGCAAATTTTTGTCAAAACTTTAACGGGAAAAACTATCACGCTGGAGGTCGAGCCGTC 9789 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || || | || || | ||| ||||| |||||||||||||| ||||| || ||||| Sbjct 9788 AGACACAATTGAAAATGTTAAAGCTAAAATACAAGACAAGGAGGGCATTCCCCCTGATCA 9729 Query 22338 ACAACGTCTTATATTTGCCGGCAA 22361 ||| | | || ||||| || || Sbjct 9728 GCAAAGATTGATTTTTGCTGGTAA 9705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419613741643840