Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12]
22,336 sequences; 218,332,512 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq259 95.1 1e-14
seq2467 93.3 4e-14
>seq259
Length=51451
Score = 95.1 bits (104), Expect = 1e-14
Identities = 115/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 22211 TTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGG 22270
|||||| |||||||| || || ||||| || || || |||||| |||| | ||||| |
Sbjct 9620 TTGTAATCATGCAAATCTTCGTCAAAACGTTGACTGGAAAAACGATCACATTGGAAGTAG 9679
Query 22271 AAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCAC 22330
|| | | ||||| | || | | || |||||||||||||| ||||||||||| |
Sbjct 9680 AACCTTCTGATACAATTGAGAACGTGAAGGCGAAAATTCAAGACAAAGAGGGTATTCCGC 9739
Query 22331 CCGATCAACAACGTCTTATATTTGCCGGCAAACAGTT 22367
| ||||| || || | |||||||| || | ||| ||
Sbjct 9740 CGGATCAGCAGCGCTTGATATTTGCAGGTATACAATT 9776
Score = 91.5 bits (100), Expect = 1e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || | || || |||||| ||||| | ||||| || | |
Sbjct 12105 ATGCAAATTTTCGTAAAGACCCTCACAGGCAAAACGATCACTTTAGAAGTCGAGCCTTCA 12164
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || || | ||| ||| ||||| || || || || |||||||| |||||
Sbjct 12165 GATACCATTGAAAATGTTAAAGCAAAGATTCAGGATAAAGAAGGAATTCCACCTGATCAG 12224
Query 22339 CAACGTCTTATATTTGCCGG 22358
||||| ||||| ||||| ||
Sbjct 12225 CAACGACTTATTTTTGCTGG 12244
Score = 82.4 bits (90), Expect = 6e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| |||||||| ||||| | || || || || | ||| | || || || | |
Sbjct 11820 ATGCAGATTTTTGTCAAAACCCTTACAGGAAAGACTATAACTTTGGAGGTAGAGCCATCA 11879
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || ||||| |||||||||||||| ||||| ||||| || |||||
Sbjct 11880 GATACGATTGAAAATGTCAAAGCCAAAATTCAAGACAAAGAGGGAATTCCTCCAGATCAG 11939
Query 22339 CAACGTCTTATATTTGCCGG 22358
||||| || || ||||| ||
Sbjct 11940 CAACGACTAATCTTTGCTGG 11959
>seq2467
Length=23714
Score = 93.3 bits (102), Expect = 4e-14
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
||||||||||||||| ||||||||||| || ||||| |||| || || || || | |
Sbjct 9848 GATGCAAATTTTTGTCAAAACTTTAACGGGAAAAACTATCACGCTGGAGGTCGAGCCGTC 9789
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| || | || || | ||| ||||| |||||||||||||| ||||| || |||||
Sbjct 9788 AGACACAATTGAAAATGTTAAAGCTAAAATACAAGACAAGGAGGGCATTCCCCCTGATCA 9729
Query 22338 ACAACGTCTTATATTTGCCGGCAA 22361
||| | | || ||||| || ||
Sbjct 9728 GCAAAGATTGATTTTTGCTGGTAA 9705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419613741643840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |