Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2467 105 1e-17 seq259 105 1e-17 >seq2467 Length=23714 Score = 105 bits (116), Expect = 1e-17 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381 || |||||||| | || ||||| || ||||||||||| |||||||||||||| || ||| Sbjct 9135 CCAGCGAATATCAACCTCTGTTGATCAGGTGGAATGCCCTCCTTGTCTTGAATTTTAGCC 9194 Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || ||| || || || || | | ||||| ||||| || || || || || ||||| Sbjct 9195 TTTACGTTTTCAATTGTATCCGACGGCTCTACCTCCAACGTAATAGTCTTGCCGGTGAGC 9254 Query 68442 GTCTTGACGAATATCTGCATT 68462 || ||||| ||||| |||||| Sbjct 9255 GTTTTGACAAATATTTGCATT 9275 Score = 105 bits (116), Expect = 1e-17 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399 ||||| ||||| || |||||||| ||||||||||| || ||||| ||| ||||| ||| Sbjct 10860 TGTTGATCGGGAGGGATGCCTTCTTTGTCTTGAATTTTCGCCTTTACGTTTTCGATCGTG 10919 Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459 || | | ||| ||||| || || || ||||| ||||| | ||||| ||||| |||||| Sbjct 10920 TCAGAAGGTTCCACTTCTAACGTAATTGTTTTACCCGTCAACGTCTTTACGAAGATCTGC 10979 Query 68460 ATT 68462 ||| Sbjct 10980 ATT 10982 Score = 104 bits (114), Expect = 4e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381 || ||||| || | | ||||| || || ||||| ||||| |||||||||||||||||| Sbjct 9414 CCTGCGAAAATTAAGCGCTGTTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCC 9473 Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || ||| || || || || | || ||| ||||| | || || || || ||||||||| Sbjct 9474 TTAACGTTTTCTATCGTATCAGATGGTTCCACTTCAAGCGTTATCGTCTTGCCCGTGAGG 9533 Query 68442 GTCTTGACGAATATCTGCAT 68461 ||||| ||||| || ||||| Sbjct 9534 GTCTTCACGAAAATTTGCAT 9553 Score = 104 bits (114), Expect = 4e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381 ||||| || || | || ||| || || || || || ||||| ||||| |||||||| || Sbjct 9990 CCGGCAAAAATCAATCGTTGCTGATCCGGAGGTATCCCTTCTTTGTCCTGAATCTTCGCT 10049 Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || || || || ||||| | || ||| |||||||| || || |||||||| || | Sbjct 10050 TTAACATTTTCAATCGTGTCCGATGGTTCAACTTCCAAAGTAATAGTTTTTCCAGTCAAT 10109 Query 68442 GTCTTGACGAATATCTGCAT 68461 |||||||||||||||||||| Sbjct 10110 GTCTTGACGAATATCTGCAT 10129 Score = 87.8 bits (96), Expect = 3e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || || || || | |||||| || || || |||||||| ||||||||||| || || Sbjct 9705 TTACCAGCAAAAATCAATCTTTGCTGATCAGGGGGAATGCCCTCCTTGTCTTGTATTTTA 9764 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 || || || || || ||||||| | || || |||| ||||| ||||||||||| Sbjct 9765 GCTTTAACATTTTCAATTGTGTCTGACGGCTCGACCTCCAGCGTGATAGTTTTTCCCGTT 9824 Query 68439 AGGGTCTTGACGAATATCTGCAT 68461 | || ||||| || || ||||| Sbjct 9825 AAAGTTTTGACAAAAATTTGCAT 9847 >seq259 Length=51451 Score = 105 bits (116), Expect = 1e-17 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381 || || ||||| |||| ||||| || ||||||||||| || ||||| |||||||||||| Sbjct 13096 CCAGCAAATATTAGTCGCTGTTGATCAGGTGGAATGCCCTCTTTGTCCTGAATCTTTGCC 13037 Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || ||| ||||| ||||| | | || || ||||| || || || || || || || Sbjct 13036 TTCACGTTTTCGATTGTGTCAGACGGCTCGACCTCCAATGTTATAGTCTTGCCAGTAAGA 12977 Query 68442 GTCTTGACGAATATCTGCATT 68462 || || |||||||| |||||| Sbjct 12976 GTTTTAACGAATATTTGCATT 12956 Score = 104 bits (114), Expect = 4e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399 || ||||| |||||||| |||||||| ||||||||||| ||||| || ||| ||||| Sbjct 11651 TGCTGGTCTGGTGGAATCCCTTCCTTATCTTGAATCTTAGCCTTAACATTCTCTATGGTA 11592 Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459 || | | ||| || ||||| || || ||||| || || || ||||| ||||| |||||| Sbjct 11591 TCAGAAGGTTCAACCTCCAAAGTAATCGTTTTGCCGGTAAGCGTCTTTACGAAAATCTGC 11532 Query 68460 AT 68461 || Sbjct 11531 AT 11530 Score = 104 bits (114), Expect = 4e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381 || || || || |||| ||| || || |||||||| ||||| || || ||||||||||| Sbjct 12244 CCAGCAAAAATAAGTCGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATCTTTGCT 12185 Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || || || ||||| |||| | || ||||| || ||||| ||||| || |||||| Sbjct 12184 TTAACATTTTCAATGGTATCTGAAGGCTCGACTTCTAAAGTGATCGTTTTGCCTGTGAGG 12125 Query 68442 GTCTTGACGAATATCTGCAT 68461 ||||| ||||| || ||||| Sbjct 12124 GTCTTTACGAAAATTTGCAT 12105 Score = 104 bits (114), Expect = 4e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || || || || ||||| ||||| || || ||||| ||||| || || |||||||| Sbjct 12819 CTTACCTGCAAAAATAAGTCTCTGTTGATCCGGAGGAATCCCTTCTTTATCCTGAATCTT 12760 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 ||||| || || || ||||| | || ||| ||||||||||| || || || || || Sbjct 12759 CGCCTTAACATTTTCAATCGTGTCCGATGCTTCAACTTCCAAGGTAATTGTCTTGCCTGT 12700 Query 68438 GAGGGTCTTGACGAATATCTGCATT 68462 || |||||||| || || |||||| Sbjct 12699 AAGCGTCTTGACAAAAATTTGCATT 12675 Score = 96.9 bits (106), Expect = 6e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381 || || ||||| | | || || || || ||||| || || ||||||||||| || ||| Sbjct 9767 CCTGCAAATATCAAGCGCTGCTGATCCGGCGGAATACCCTCTTTGTCTTGAATTTTCGCC 9708 Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || ||| ||| || || || | | |||||||||||| ||||| |||||||| || | Sbjct 9707 TTCACGTTCTCAATTGTATCAGAAGGTTCTACTTCCAATGTGATCGTTTTTCCAGTCAAC 9648 Query 68442 GTCTTGACGAATATCTGCATTAT 68464 || |||||||| || ||||| || Sbjct 9647 GTTTTGACGAAGATTTGCATGAT 9625 Score = 96.9 bits (106), Expect = 6e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 68316 TGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATC 68375 ||| | || || || || |||| ||| || || || ||||| || || ||||||||||| Sbjct 11965 TGCATACCAGCAAAGATTAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAATT 11906 Query 68376 TTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCC 68435 || || ||||| || || || |||| || ||||| ||||| || || || ||||| Sbjct 11905 TTGGCTTTGACATTTTCAATCGTATCTGATGGCTCTACCTCCAAAGTTATAGTCTTTCCT 11846 Query 68436 GTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| ||||| || |||||||| Sbjct 11845 GTAAGGGTTTTGACAAAAATCTGCAT 11820 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381 || || ||||| | | || || ||||| || || ||||| |||||||||||||| || Sbjct 12537 CCTGCAAATATTAAGCGCTGCTGATCGGGAGGGATTCCTTCTTTGTCTTGAATCTTGGCT 12478 Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || ||| || ||||| || | || || ||||| | ||| || || || || || ||| Sbjct 12477 TTCACGTTTTCAATGGTATCAGATGGCTCAACTTCAAGGGTAATCGTCTTGCCGGTCAGG 12418 Query 68442 GTCTTGACGAATATCTGCAT 68461 || ||||||||||||||||| Sbjct 12417 GTTTTGACGAATATCTGCAT 12398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921365083025920