Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2467 118 3e-21 seq259 104 6e-17 >seq2467 Length=23714 Score = 118 bits (130), Expect = 3e-21 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || ||||||||||| | ||||| ||| | ||||||||||||||| |||||||| || Sbjct 10548 TTGCCTGCGAAGATTAAGCGCTGCTGATCAGGTGGGATTCCTTCTTTGTCCTGGATCTTG 10607 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || || |||||||| || | ||| || || ||||| | || |||||||| |||||| Sbjct 10608 GCCTTGACGTTTTCGATCGTATCAGACGGCTCAACTTCCAAAGTAATCGTCTTTCCGGTC 10667 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| |||||||| Sbjct 10668 AGAGTTTTAACGAAGATCTGCAT 10690 Score = 100 bits (110), Expect = 7e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393 |||||||| || | ||||||||| | || ||||||||||| || || || || || Sbjct 9414 CCTGCGAAAATTAAGCGCTGTTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCC 9473 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || ||||||||||| | ||| | ||| ||||| ||||| |||||||| || || || Sbjct 9474 TTAACGTTTTCTATCGTATCAGATGGTTCCACTTCAAGCGTTATCGTCTTGCCCGTGAGG 9533 Query 288454 GTCTTGACGAATATCTGCAT 288473 ||||| ||||| || ||||| Sbjct 9534 GTCTTCACGAAAATTTGCAT 9553 >seq259 Length=51451 Score = 104 bits (114), Expect = 6e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||||||||| || || || || |||||||||||||| || | ||| | || Sbjct 12507 GGGATTCCTTCTTTGTCTTGAATCTTGGCTTTCACGTTTTCAATGGTATCAGATGGCTCA 12448 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || |||||||| |||||||| || ||||||||||||||||| Sbjct 12447 ACTTCAAGGGTAATCGTCTTGCCGGTCAGGGTTTTGACGAATATCTGCAT 12398 Score = 87.8 bits (96), Expect = 4e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT 288393 ||||| ||||| | | ||| ||| | ||| ||||||||||||||||| ||||| ||| Sbjct 11392 CCTGCAAAGATTAATCTCTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATTTTTGCT 11333 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || |||||||| || | ||| | || || || | || || || || || |||| Sbjct 11332 TTTACGTTTTCGATCGTATCAGATGGCTCGACCTCCAAAGTTATTGTTTTACCCGTCAAG 11273 Query 288454 GTCTTGACGAATATCTGCATT 288474 || |||||||| ||||||||| Sbjct 11272 GTTTTGACGAAAATCTGCATT 11252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179316806503808