Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq259 105 6e-18 seq2467 98.7 9e-16 >seq259 Length=51451 Score = 105 bits (116), Expect = 6e-18 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 45215 TCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTAC 45274 ||||||||| || || ||||| ||||||||||| ||||| ||| ||| | ||| | Sbjct 12230 TCGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATCTTTGCTTTAACATTTTCAAT 12171 Query 45275 GGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAAT 45334 ||| || |||| ||||||||| | ||| | ||||||||| || || || ||||| ||||| Sbjct 12170 GGTATCTGAAGGCTCGACTTCTAAAGTGATCGTTTTGCCTGTGAGGGTCTTTACGAAAAT 12111 Query 45335 TTGCAT 45340 |||||| Sbjct 12110 TTGCAT 12105 Score = 100 bits (110), Expect = 3e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 ||||| | | ||||| | ||||| || |||||||| || ||||| ||||| |||||||| Sbjct 11679 CAATTTTGTACCTGCAAAAATCAAGCGCTGCTGGTCTGGTGGAATCCCTTCCTTATCTTG 11620 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 ||| || || | |||| ||| || |||| || || || | ||||| |||||| Sbjct 11619 AATCTTAGCCTTAACATTCTCTATGGTATCAGAAGGTTCAACCTCCAAAGTAATCGTTTT 11560 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || || ||||| ||||| ||||| Sbjct 11559 GCCGGTAAGCGTCTTTACGAAAATCTGCAT 11530 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 |||||| | ||||| ||||||| || ||||| ||||||||||| || ||||| |||||| Sbjct 9776 AATTGTATACCTGCAAATATCAAGCGCTGCTGATCCGGCGGAATACCCTCTTTGTCTTGA 9717 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 ||||| || | || | || | || || |||| || ||||| | || | |||||| Sbjct 9716 ATTTTCGCCTTCA-CGTTCTCAATTGTATCAGAAGGTTCTACTTCCAATGTGATCGTTTT 9658 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||||| || || |||||||| Sbjct 9657 TCCAGTCAACGTTTTGACGAAGATTTGCAT 9628 >seq2467 Length=23714 Score = 98.7 bits (108), Expect = 9e-16 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 45187 CGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTAT 45246 |||| | || || || || | ||||||| |||||| || || |||||||| || || | Sbjct 9694 CGTCTATTTAATTACCAGCAAAAATCAATCTTTGCTGATCAGGGGGAATGCCCTCCTTGT 9753 Query 45247 CTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCG 45306 |||| ||||| ||| | ||| | ||||| || | |||||| || || || | | Sbjct 9754 CTTGTATTTTAGCTTTAACATTTTCAATTGTGTCTGACGGCTCGACCTCCAGCGTGATAG 9813 Query 45307 TTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGC 45345 |||| || |||| |||||| ||||||||||||||| ||| Sbjct 9814 TTTTTCCCGTTAAAGTTTTGACAAAAATTTGCATCCCGC 9852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451877000706560