Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq7623 114 5e-20 seq2467 113 2e-19 seq259 102 3e-16 seq65 102 3e-16 >seq7623 Length=9951 Score = 114 bits (126), Expect = 5e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 451217 TATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAA 451276 || || || ||||| ||||||||| | ||||||||||| | ||||| | || ||| Sbjct 2647 TACAAGGGCGAAACGAAAACTTTTACACCTGAAGAAATCAGCGCAATGGTGTTGACAAAA 2588 Query 451277 ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTT 451336 ||||| || || || ||| || |||| | || ||||| || ||||| || Sbjct 2587 ATGAAGGAGACTGCGGAAGCTTACCTTGGAAAGACCTGTAAAGATGCGGTCATTACGGTG 2528 Query 451337 CCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGT 451396 || || || ||||| ||| | || || || ||||| |||||||| || ||| | || Sbjct 2527 CCGGCATACTTCAACGATTCGCAGCGACAGGCAACGAAAGATGCGGGTACGATTTCGGGG 2468 Query 451397 TTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 || ||||| ||||| || ||||| || ||||| || ||||| | |||||||| Sbjct 2467 TTGAATGTGCTTCGTATCATTAACGAGCCTACTGCTGCTGCCATCGCATATGG 2415 >seq2467 Length=23714 Score = 113 bits (124), Expect = 2e-19 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || || || || || || || || ||||| || ||| ||||| Sbjct 9553 ATGCAAATTTTCGTGAAGACCCTCACGGGCAAGACGATAACGCTTGAAGTGGAACCATCT 9494 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| |||| ||| |||||||| || ||||||||||||||||||||| Sbjct 9493 GATACGATAGAAAACGTTAAGGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCAA 9434 Query 391170 CAACGTTTAATTTTCTCAGG 391189 || || ||||||||| |||| Sbjct 9433 CAGCGCTTAATTTTCGCAGG 9414 Score = 102 bits (112), Expect = 3e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || ||| ||||||| |||||||||||| | || |||||| |||| Sbjct 10129 ATGCAGATATTCGTCAAGACATTGACTGGAAAAACTATTACTTTGGAAGTTGAACCATCG 10070 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | ||||| || ||||| || || ||||| || ||||| ||||| Sbjct 10069 GACACGATTGAAAATGTTAAAGCGAAGATTCAGGACAAAGAAGGGATACCTCCGGATCAG 10010 Query 391170 CAACGTTTAATTTT 391183 ||||| || ||||| Sbjct 10009 CAACGATTGATTTT 9996 Score = 93.3 bits (102), Expect = 2e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| || ||||| | || || ||||||||||| | || |||||| | || Sbjct 10408 AATGCAGATTTTTGTCAAAACGTTAACGGGCAAAACTATTACGTTGGAAGTTGAACCGTC 10349 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | |||||| | |||| |||||||| ||||| || || |||||||| ||||| Sbjct 10348 GGACACGATTGAAAATGTTAAGGCTAAAATTCAGGATAAAGAGGGGATTCCTCCGGATCA 10289 Query 391169 ACAACGTTTAATTTTCTCAGG 391189 || || || |||||| |||| Sbjct 10288 GCAGCGATTGATTTTCGCAGG 10268 >seq259 Length=51451 Score = 102 bits (112), Expect = 3e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| ||||| |||| |||||||| || ||| | || || || |||| Sbjct 11252 AATGCAGATTTTCGTCAAAACCTTGACGGGTAAAACAATAACTTTGGAGGTCGAGCCATC 11311 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| || ||| | ||| ||||||||| ||||| ||||||||||| |||||||| Sbjct 11312 TGATACGATCGAAAACGTAAAAGCAAAAATTCAGGATAAAGAAGGAATTCCACCTGATCA 11371 Query 391169 ACAACGTTTAATTTTCTCAGG 391189 || | ||||| || |||| Sbjct 11372 GCAGAGATTAATCTTTGCAGG 11392 Score = 98.7 bits (108), Expect = 4e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || || || || ||||| || ||| | || || || | || Sbjct 12105 ATGCAAATTTTCGTAAAGACCCTCACAGGCAAAACGATCACTTTAGAAGTCGAGCCTTCA 12164 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||||| | ||||| ||| ||||| ||||| ||||||||||| |||||||| Sbjct 12165 GATACCATTGAAAATGTTAAAGCAAAGATTCAGGATAAAGAAGGAATTCCACCTGATCAG 12224 Query 391170 CAACGTTTAATTTT 391183 ||||| | ||||| Sbjct 12225 CAACGACTTATTTT 12238 Score = 95.1 bits (104), Expect = 5e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || || || || ||||| |||||| | || |||||| | ||| Sbjct 11530 ATGCAGATTTTCGTAAAGACGCTTACCGGCAAAACGATTACTTTGGAGGTTGAACCTTCT 11589 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | |||| || ||||||||||||||||| ||||| || || || Sbjct 11590 GATACCATAGAGAATGTTAAGGCTAAGATTCAAGATAAGGAAGGGATTCCACCAGACCAG 11649 Query 391170 CAACGTTTAATTTTCTCAGG 391189 || || || ||||| |||| Sbjct 11650 CAGCGCTTGATTTTTGCAGG 11669 Score = 89.7 bits (98), Expect = 2e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| || || || || ||||| ||| | || || || |||| Sbjct 11820 ATGCAGATTTTTGTCAAAACCCTTACAGGAAAGACTATAACTTTGGAGGTAGAGCCATCA 11879 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | | ||| ||||||||||| || || ||||||||||| ||||| Sbjct 11880 GATACGATTGAAAATGTCAAAGCCAAAATTCAAGACAAAGAGGGAATTCCTCCAGATCAG 11939 Query 391170 CAACGTTTAATTTT 391183 ||||| |||| || Sbjct 11940 CAACGACTAATCTT 11953 >seq65 Length=71031 Score = 102 bits (112), Expect = 3e-16 Identities = 144/199 (72%), Gaps = 10/199 (5%) Strand=Plus/Plus Query 451232 AAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCA 451291 ||||||||||| || ||| | |||||| | ||||| | |||||||| |||||||| Sbjct 29999 AAAACTTTTGCGCCAGAACAGATTTCAGCCATGGTATTAGAGAAAATGAAGGAAACAGCC 30058 Query 451292 GAACAATATATTGGTTCTCCA----GTTACTGATGCAGTAATTACTGTTCCCGCTTATTT 451347 ||||| ||| |||| ||| ||||| |||| || ||||||||||| || || || Sbjct 30059 GAACAGTATCTTGG----CCAGAACGTTACGCATGCTGTTATTACTGTTCCTGCATACTT 30114 Query 451348 CAATGATGCACAACGGCAAGCAACTAAAGATGCAGG-ACATATTGCTGGTTTAAATGTTC 451406 ||| ||||| || | || || || || || || || ||| || || || | | |||| Sbjct 30115 CAACGATGCGCAGAGACAGGCGACGAAGGACGCTGGTACA-ATAGCAGGACTCACTGTTT 30173 Query 451407 TTCGAATTATTAATGAACC 451425 | || ||||| || ||||| Sbjct 30174 TGCGTATTATAAACGAACC 30192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975152988908288