Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq65 132 4e-25 seq7623 113 3e-19 seq7913 93.3 3e-13 >seq65 Length=71031 Score = 132 bits (146), Expect = 4e-25 Identities = 316/470 (67%), Gaps = 11/470 (2%) Strand=Plus/Minus Query 518201 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 518260 ||||| || ||||| | ||||||| | || || || ||| | || || || || || || Sbjct 30192 GGTTCGTTTATAATACGCAAAACAGTGAGTCCTGCTATTGTACCAGCGTCCTTCGTCGCC 30133 Query 518261 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTA 518320 ||||| || | |||||| || |||||||||||||||||||| |||| || || | | Sbjct 30132 TGTCTCTGCGCATCGTTGAAGTATGCAGGAACAGTAATAACAGCATGCGTAACGTTCTGG 30073 Query 518321 CCAATATAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 518378 |||| ||| | || || |||| |||||||| ||| | ||| | |||||| |||| Sbjct 30072 CCAAGATA--CTGTTCGGCTGTTTCCTTCATTTTCTCTAATACCATGGCTGAAATCTGTT 30015 Query 518379 CTGG-GGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCA 518437 |||| | || | | ||| | ||||| || |||| || | | || || Sbjct 30014 CTGGCGCAAAAGTTTTTGAAGCGCCTTTGA-CCGAAACTTTAATTTCAACTGATTTTCCC 29956 Query 518438 ACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAA 518497 ||| |||| | || ||||| | ||| | || ||| | || ||| | | Sbjct 29955 TTTTTATCAACTGTGAAAGGCCAATGTTTTCTGTCATTTTGCAGTTCTTTGTCTTCCCAG 29896 Query 518498 TCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTG-CAGCTTG 518556 || ||||| | || |||| |||| |||| || || ||||||||||| ||| ||| Sbjct 29895 CTTCGACCAAGAATTCTTTTTACATCGAAAACTGTGTTTTCTGGATTAATTGTCAG-TTG 29837 Query 518557 ATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTC---TGTAAATGAAACATATGATGG 518613 || |||||| |||||||| | || | |||| || || |||| ||| ||||| || Sbjct 29836 ATTTTTGGCAGCATCTCCGACCAAACGTTCGCCTTCAGGAGTGAATGCAACGTATGAAGG 29777 Query 518614 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTT 518663 ||| | || || || || || || || || || || ||| | ||||||| Sbjct 29776 AGTGATCCGGTTTCCCTGGTCGTTAGCTATGATCTCTACTCTGCCATTTT 29727 >seq7623 Length=9951 Score = 113 bits (124), Expect = 3e-19 Identities = 246/365 (67%), Gaps = 4/365 (1%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 |||||||| | |||||| || | ||||||||||| || || ||||| || | | ||| Sbjct 2403 TTTTTATCCAAACCATATGCGATGGCAGCAGCAGTAGGCTCGTTAATGATACGAAGCACA 2462 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || | || | ||| | || |||||||| || || |||| || |||||||| || ||| Sbjct 2463 TTCAACCCCGAAATCGTACCCGCATCTTTCGTTGCCTGTCGCTGCGAATCGTTGAAGTAT 2522 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTAC--TTCTTTACCAATATAAGCGCTTGCCGTTT 518342 || || || ||||| || ||||| |||| ||||| |||| ||||| || || | Sbjct 2523 GCCGGCACCGTAATGACCGCATC-TTTACAGGTCTTT-CCAAGGTAAGCTTCCGCAGTCT 2580 Query 518343 GTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCAT 518402 |||||||| | || | ||||| |||| ||| || | | | || | ||| Sbjct 2581 CCTTCATTTTTGTCAACACCATTGCGCTGATTTCTTCAGGTGTAAAAGTTTTCGTTTCGC 2640 Query 518403 TTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGT 518462 | ||| || | | | |||||| || |||| ||||| || || ||||||| Sbjct 2641 CCTTGTATTCAACCTGCACCTTGGGTTTACCGCCGTCATTTATAACCTTGAACGGCCAGT 2700 Query 518463 ATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCAT 518522 |||||| || ||||| ||| || | |||| || || ||||| || ||||||| Sbjct 2701 GTTTCATGTCAGATTGTACAGGGGCATCCTCAAAACGCCTGCCGATTAAGCGCTTTGCAT 2760 Query 518523 CAAAA 518527 | ||| Sbjct 2761 CTAAA 2765 Score = 95.1 bits (104), Expect = 9e-14 Identities = 183/264 (69%), Gaps = 6/264 (2%) Strand=Plus/Plus Query 517608 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 517667 |||| |||||||| || |||||||| || || | | | || || | ||| ||||||| Sbjct 1686 CAGCGCCATATGCCACCGCTTCATCCGGGTTTATGCTCTTGTTCAGCTCTTTTCCATTGA 1745 Query 517668 AAAAATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACA 517726 | || | || | || || | |||||||||||||||| ||||| ||||| | || Sbjct 1746 AGAAGTCCTGCAGCAACTTCTGG-ACCTTAGGAATACGAGTAGATCCGCCAACAAGCACT 1804 Query 517727 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 517786 | ||||| | ||| ||||| || ||||| | ||| | | || || || |||||| Sbjct 1805 ACGTCATGGATCTGAGATTTGTCAAGTTTGGCATCTCTCAGAGACTTCTCCACAGGTTCA 1864 Query 517787 AGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACA 517846 | | |||||||| | | ||||||||| || ||||||| |||| ||| | Sbjct 1865 CAGGTAGAATTGAACAAGTCAGCATTAAGTTCTTCAAACCTAGCTCTCGTAATAGT--CG 1922 Query 517847 T-TATAA-TCAATTCCTTCGAACA 517868 | || || || ||||||||||||| Sbjct 1923 TGTAGAAGTCTATTCCTTCGAACA 1946 >seq7913 Length=9556 Score = 93.3 bits (102), Expect = 3e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 668844 AAAGATTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATA 668903 ||||| | | ||| ||||| || || || ||||||||| |||||||||||||||| ||| Sbjct 4849 AAAGACTGAAAGGAAAAGAGGGCCGCATAAGAGGAAATCTGATGGGAAAACGTGTGGATT 4908 Query 668904 TGTCTGCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTC 668963 | |||||||| || || || || ||||||| ||||| || || || | | || |||| Sbjct 4909 TTTCTGCACGAACCGTCATCACCCCTGATCCGAATATAGCAATCGATCAGTTAGGAGTTC 4968 Query 668964 CTCTTATTATTGCTAAAAATCTTACTTTT 668992 | | ||||| ||||| | || ||| Sbjct 4969 CGAAGACGATTGCCCAAAATTTAACATTT 4997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3779714014105216