Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12]
22,336 sequences; 218,332,512 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq7623 156 5e-33
>seq7623
Length=9951
Score = 156 bits (172), Expect = 5e-33
Identities = 260/369 (70%), Gaps = 9/369 (2%)
Strand=Plus/Plus
Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACA 7653
|| ||||| | ||| || ||||| || || || || || || ||||| |||||||| |||
Sbjct 2403 TTTTTATCCAAACCATATGCGATGGCAGCAGCAGTAGGCTCGTTAATGATACGAAGCACA 2462
Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713
|||| || | ||| || ||||||||||||| || ||||| ||||||||||| |||||
Sbjct 2463 -TTCAACCCCGAAATCGTACCCGCATCTTTCGTTGCCTGTCGCTGCGAATCGTTGAAGTA 2521
Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773
||||| ||||| | |||||| || | |||| || || || | |||||| | ||
Sbjct 2522 TGCCGGCACCGTAATGACCGCATCTTTACAGGTCTTTCCAAGGTAAGCTTCCGCAGTCTC 2581
Query 7774 TTTCATTTTGGTAAGAACCAT--CGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCA 7831
|||||||| || | ||||| || || || ||||||| | ||| |||||||||
Sbjct 2582 CTTCATTTTTGTCAACACCATTGCGCTG--ATTTCTTCAGGTGTAAAAGTTTTCGTTTCG 2639
Query 7832 CCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGAC 7891
|| || | ||||| | | | |||||||| |||| | | |||||||| ||| |
Sbjct 2640 CCCTTGTATTCAACCTGCACCTTGGGTTTA-CCGC--CGTCATTTATAACCTTGAACGGC 2696
Query 7892 CAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTT 7951
|| | |||||| || ||| || | ||| ||| || ||||| | ||||||
Sbjct 2697 CAGTGTTTCATGTCAGATTGTACAGGGGCATCCTCAAAACGCCTGCCGATTAAGCGCTTT 2756
Query 7952 GCATCAAAA 7960
||||| |||
Sbjct 2757 GCATCTAAA 2765
Score = 127 bits (140), Expect = 3e-24
Identities = 175/245 (71%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 7334 GATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTA 7393
|| || |||| ||| || || ||||| || || | |||||| || || ||||| || |||
Sbjct 2038 GACAAAGTTCTCTTGGCTCGTTCACAGGCAGTCCTTAAACGCCGCAGAGCACGTGGATTA 2097
Query 7394 CCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTC 7453
|| |||||||| ||||| ||||| | |||||||| | || || | | ||
Sbjct 2098 CCCGAAATATCCTTCTTGTGTTTCCTCTTAAACTCCGCTACAAAATGATTCACCATTCGG 2157
Query 7454 GAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATA 7513
||||||||||| || |||||||||||||| ||||| || | || |||||||| |||
Sbjct 2158 TTGTCGAAATCTTCGCCTCCCAAGTGTGTATCGCCCGCCGTTGACTTTACTTCAAATATA 2217
Query 7514 CCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573
|| |||| || | | | |||||||| || || ||||| || || || || || |
Sbjct 2218 CCATCTTCGATTGTCAGGATGGAAACATCGAAGGTGCCACCGCCAAGATCGAATATCAAC 2277
Query 7574 ACGTT 7578
|||||
Sbjct 2278 ACGTT 2282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634955470922240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |