Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq2467 116 8e-21 seq259 107 4e-18 >seq2467 Length=23714 Score = 116 bits (128), Expect = 8e-21 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 194999 TACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTT 195058 ||||||| || || | || ||||| || ||||| ||||||||||||||||||||||| Sbjct 10840 TACCTGCAAAAATCAAGCGCTGTTGATCGGGAGGGATGCCTTCTTTGTCTTGAATTTTCG 10899 Query 195059 GCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCA 195118 ||| ||||| || || ||||| ||| ||||||||| | |||| || || || |||| Sbjct 10900 CCTTTACGTTTTCGATCGTGTCAGAAGGTTCCACTTCTAACGTAATTGTTTTACCCGTCA 10959 Query 195119 AAGTTTTTACGAACACTTGCATTT 195142 | || |||||||| | ||||||| Sbjct 10960 ACGTCTTTACGAAGATCTGCATTT 10983 Score = 113 bits (124), Expect = 1e-19 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 194999 TACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTT 195058 |||||||||| || | || ||||| || |||||||| ||||||||||||||||| ||| Sbjct 9412 TACCTGCGAAAATTAAGCGCTGTTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTG 9471 Query 195059 GCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCA 195118 ||| ||||| || || || || || |||||||||||| || | |||||| || || | Sbjct 9472 CCTTAACGTTTTCTATCGTATCAGATGGTTCCACTTCAAGCGTTATCGTCTTGCCCGTGA 9531 Query 195119 AAGTTTTTACGAACACTTGCAT 195140 || || ||||| | |||||| Sbjct 9532 GGGTCTTCACGAAAATTTGCAT 9553 Score = 93.3 bits (102), Expect = 9e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| ||||||||||| | || || || || || || || ||||||||||| || || || Sbjct 10547 CTTGCCTGCGAAGATTAAGCGCTGCTGATCAGGTGGGATTCCTTCTTTGTCCTGGATCTT 10606 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| || || || || || || ||||| | |||| ||||||||| || Sbjct 10607 GGCCTTGACGTTTTCGATCGTATCAGACGGCTCAACTTCCAAAGTAATCGTCTTTCCGGT 10666 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || |||||| ||||| | ||||| Sbjct 10667 CAGAGTTTTAACGAAGATCTGCAT 10690 Score = 89.7 bits (98), Expect = 1e-12 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 194999 TACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTT 195058 |||| || || || | |||||| || || ||||| || ||||||||||| ||||| || Sbjct 9988 TACCGGCAAAAATCAATCGTTGCTGATCCGGAGGTATCCCTTCTTTGTCCTGAATCTTCG 10047 Query 195059 GCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCA 195118 || || || ||||| |||||||| ||| ||||| | |||| || ||||| |||| Sbjct 10048 CTTTAACATTTTCAATCGTGTCCGATGGTTCAACTTCCAAAGTAATAGTTTTTCCAGTCA 10107 Query 195119 AAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 10108 ATGTCTTGACGAATATCTGCAT 10129 >seq259 Length=51451 Score = 107 bits (118), Expect = 4e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 194999 TACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTT 195058 ||||||| || || | || || || || || ||||| || ||||||||||||||||| Sbjct 9769 TACCTGCAAATATCAAGCGCTGCTGATCCGGCGGAATACCCTCTTTGTCTTGAATTTTCG 9710 Query 195059 GCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCA 195118 ||| ||||||||||| || || ||| ||| ||||| | || | ||| ||||| |||| Sbjct 9709 CCTTCACGTTCTCAATTGTATCAGAAGGTTCTACTTCCAATGTGATCGTTTTTCCAGTCA 9650 Query 195119 AAGTTTTTACGAACACTTGCAT 195140 | ||||| ||||| | |||||| Sbjct 9649 ACGTTTTGACGAAGATTTGCAT 9628 Score = 104 bits (114), Expect = 5e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 194999 TACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTT 195058 ||||||| || || | || || || || ||||| || ||||||||||||||||| || Sbjct 12539 TACCTGCAAATATTAAGCGCTGCTGATCGGGAGGGATTCCTTCTTTGTCTTGAATCTTGG 12480 Query 195059 GCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCA 195118 || ||||| |||||||| || || || ||||||||||||| |||||| || |||| Sbjct 12479 CTTTCACGTTTTCAATGGTATCAGATGGCTCAACTTCAAGGGTAATCGTCTTGCCGGTCA 12420 Query 195119 AAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| | ||||| Sbjct 12419 GGGTTTTGACGAATATCTGCAT 12398 Score = 96.9 bits (106), Expect = 8e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 ||| |||| || ||||| |||||||| || ||||||||||| || ||||||||||||||| Sbjct 11965 TGCATACCAGCAAAGATTAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAATT 11906 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 || ||||| || ||||| || || || || || || | || | ||||||||| Sbjct 11905 TTGGCTTTGACATTTTCAATCGTATCTGATGGCTCTACCTCCAAAGTTATAGTCTTTCCT 11846 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || | ||||| Sbjct 11845 GTAAGGGTTTTGACAAAAATCTGCAT 11820 Score = 95.1 bits (104), Expect = 3e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055 || |||| || || ||||||||||| || || || ||||| |||||||| || ||||| | Sbjct 12249 GCATACCAGCAAAAATAAGTCGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATCT 12190 Query 195056 TTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTG 195115 || || || || |||||||| || ||| || ||||| | || | ||| || |||| Sbjct 12189 TTGCTTTAACATTTTCAATGGTATCTGAAGGCTCGACTTCTAAAGTGATCGTTTTGCCTG 12130 Query 195116 TCAAAGTTTTTACGAACACTTGCAT 195140 | | || |||||||| | |||||| Sbjct 12129 TGAGGGTCTTTACGAAAATTTGCAT 12105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109164088555712