Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq7623 102 7e-16 seq259 100 2e-15 seq65 96.9 3e-14 seq4831 93.3 3e-13 seq1606 91.5 1e-12 >seq7623 Length=9951 Score = 102 bits (112), Expect = 7e-16 Identities = 139/192 (72%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || ||||| || || || ||||| || ||||||||||| ||||| | ||| |||| ||| Sbjct 3485 GCAATAGGAATTGACTTGGGAACAACGTATAGTTGTGTCGGTGTGTTTCAACATGGCAAA 3426 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || | || || ||||| || |||||| |||| ||||| ||| || ||||||| Sbjct 3425 GTAGAGGTAATCGCTAATGACCAGGGTAACCGAACGACTCCGAGTTACGTCGCTTTCACC 3366 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACCA 550169 || || || ||| | || ||||| || || |||||| ||||| ||||| || Sbjct 3365 GACACCGAGAGGTTAATCGGCGATGCCGCTAAGAATCAAGTTGCACTG--AATCCGCACA 3308 Query 550170 ATACTATTTTTG 550181 | ||| |||||| Sbjct 3307 ACACTGTTTTTG 3296 Score = 93.3 bits (102), Expect = 3e-13 Identities = 158/224 (71%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 550316 TTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCT 550375 ||| |||| ||| |||| | ||||| || | |||||||| | || || ||| Sbjct 2626 TTTACACCTGAAGAAATCAGCGCAATGGTGTTGACAAAAATGAAGGAGACTGCGGAAGCT 2567 Query 550376 TTTGTTGGTCAAGAAGT-TACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTC 550434 | |||| |||| | || ||||| || || || || || ||||| || || || || Sbjct 2566 TACCTTGGA-AAGACCTGTAAAGATGCGGTCATTACGGTGCCGGCATACTTCAACGATTC 2508 Query 550435 ACAACGTCAAGCTACTAAAGATGCTGG-ACGTATTGCTGGACTTAATGTTCTTCGTATTA 550493 || || || || || |||||||| || ||| ||| | || | ||||| |||||||| | Sbjct 2507 GCAGCGACAGGCAACGAAAGATGCGGGTACG-ATTTCGGGGTTGAATGTGCTTCGTATCA 2449 Query 550494 TCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAA 550537 | || || |||||||||||||| | |||||||| | |||||| Sbjct 2448 TTAACGAGCCTACTGCTGCTGCCATCGCATATGGTTTGGATAAA 2405 Score = 86.0 bits (94), Expect = 5e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566 || || || |||||||| || || ||||| |||||||| ||||| |||||||||||||| Sbjct 1318 GGAATCCCACCTGCTCCGCGAGGTGTACCTCAAATTGAGGTTACATTCGATATCGATGCT 1259 Query 552567 AATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 || || || |||||||| |||| |||||| Sbjct 1258 AACGGTATATTGAATGTTGCTGCAGTTGATAA 1227 >seq259 Length=51451 Score = 100 bits (110), Expect = 2e-15 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || ||||||||||||| |||||||||||| ||||||||||||||||| ||||| ||| | Sbjct 12244 CCAGCAAAAATAAGTCGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATCTTTGCT 12185 Query 563395 TTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGA 563454 || || ||||| ||||| | | ||| | ||| | ||||| || || || Sbjct 12184 TTAACATTTTCAATGGTATCTGAAGGCTCGACTTCTAAAGTGATCGTTTTGCCTGTGAGG 12125 Query 563455 GTTTTAACGAAAATTTGCAT 563474 || || |||||||||||||| Sbjct 12124 GTCTTTACGAAAATTTGCAT 12105 Score = 95.1 bits (104), Expect = 1e-13 Identities = 107/141 (76%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || ||||| || | ||| ||||||||||| ||||||||||||||||| ||||||||| | Sbjct 11392 CCTGCAAAGATTAATCTCTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATTTTTGCT 11333 Query 563395 TTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAG 563453 ||||| || || ||||||| || || || | ||| | |||||||| || | Sbjct 11332 TTTACGTTTTCGATCGTATCAGATGGCTCGAC-CTCCAAAGTTATTGTTTTACCCGTCAA 11274 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 ||||| |||||||| ||||| Sbjct 11273 GGTTTTGACGAAAATCTGCAT 11253 Score = 89.7 bits (98), Expect = 4e-12 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || ||||| || |||| ||||||||| ||||||||||| ||||| ||||||||||| | Sbjct 11959 CCAGCAAAGATTAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAATTTTGGCT 11900 Query 563395 TTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAG 563453 || || ||||| ||||| | || ||| || | ||| | ||| || || ||||| Sbjct 11899 TTGACATTTTCAATCGTATCTGATGGCTCTAC-CTCCAAAGTTATAGTCTTTCCTGTAAG 11841 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 ||||| || ||||| ||||| Sbjct 11840 GGTTTTGACAAAAATCTGCAT 11820 >seq65 Length=71031 Score = 96.9 bits (106), Expect = 3e-14 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 552439 TTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA 552498 |||| | |||||||||||| || | | || ||||| || ||| || |||| ||| Sbjct 32171 TTCAGGTCTTTGAAGGAGAACGACCAATGACGAAAGACAACCATCTTCTGGGTAAATTTG 32230 Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATA 552558 || | || |||||||||||||| ||||| || || || |||||||||||||| || | Sbjct 32231 ATCTGACTGGCATTCCTCCTGCTCCACGTGGTGTGCCACAGATTGAAGTTACTTTTGAAA 32290 Query 552559 TCGATGCCAATGGAATTTTGAATGTGACTGC 552589 |||||| || |||||| || | || || || Sbjct 32291 TCGATGTTAACGGAATTCTGCACGTAACCGC 32321 >seq4831 Length=15448 Score = 93.3 bits (102), Expect = 3e-13 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || |||||||| | || ||||| |||||||||||| | |||||||| |||| Sbjct 8671 AGAACAAGATGCAACGTGGACTCTTTCTGAATATTGTAATCCGATAGAGTTCGGCCATCT 8730 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 || | ||||||||||||||||| | ||| ||||||||||| ||||||||| Sbjct 8731 TCTAACTGTTTTCCGGCAAAAATCAATCTCTGCTGATCAGGTGGAATTCCT 8781 >seq1606 Length=28750 Score = 91.5 bits (100), Expect = 1e-12 Identities = 116/158 (73%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 428255 GTAAAGATATATCTTGCGCTTGCGGAATCTTTACCTCCTGACATTCTAGTTCCAAATTGT 428314 ||||| |||||||| || || || || ||||| || || || || ||||||||| || Sbjct 8173 GTAAATATATATCTCGCACTAGCAGAGTCTTTGCCGCCCTGCAATCGAGTTCCAAACTGA 8232 Query 428315 CCATTAGGCATCAATAAATTAATATTATTACTTCCCACATAATTTTGGGCCATATTAACA 428374 || | |||| || | ||| | |||||| || || ||| | ||||| |||| || ||| Sbjct 8233 CCGATTGGCAACAGCAGATTCAGATTATTGCTGCCAACAAAGTTTTGCGCCAAGTTCACA 8292 Query 428375 ATGGTACTAGTTAAGGATTG--TTCACCATGATGATAT 428410 |||||||| | | || || |||||| ||||||||| Sbjct 8293 ATGGTACTCATCA--GACTGACTTCACCGTGATGATAT 8328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028114771584640