Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12]
22,336 sequences; 218,332,512 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq7623 102 7e-16
seq259 100 2e-15
seq65 96.9 3e-14
seq4831 93.3 3e-13
seq1606 91.5 1e-12
>seq7623
Length=9951
Score = 102 bits (112), Expect = 7e-16
Identities = 139/192 (72%), Gaps = 4/192 (2%)
Strand=Plus/Minus
Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051
|| ||||| || || || ||||| || ||||||||||| ||||| | ||| |||| |||
Sbjct 3485 GCAATAGGAATTGACTTGGGAACAACGTATAGTTGTGTCGGTGTGTTTCAACATGGCAAA 3426
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
|| || | || || ||||| || |||||| |||| ||||| ||| || |||||||
Sbjct 3425 GTAGAGGTAATCGCTAATGACCAGGGTAACCGAACGACTCCGAGTTACGTCGCTTTCACC 3366
Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACCA 550169
|| || || ||| | || ||||| || || |||||| ||||| ||||| ||
Sbjct 3365 GACACCGAGAGGTTAATCGGCGATGCCGCTAAGAATCAAGTTGCACTG--AATCCGCACA 3308
Query 550170 ATACTATTTTTG 550181
| ||| ||||||
Sbjct 3307 ACACTGTTTTTG 3296
Score = 93.3 bits (102), Expect = 3e-13
Identities = 158/224 (71%), Gaps = 4/224 (2%)
Strand=Plus/Minus
Query 550316 TTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCT 550375
||| |||| ||| |||| | ||||| || | |||||||| | || || |||
Sbjct 2626 TTTACACCTGAAGAAATCAGCGCAATGGTGTTGACAAAAATGAAGGAGACTGCGGAAGCT 2567
Query 550376 TTTGTTGGTCAAGAAGT-TACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTC 550434
| |||| |||| | || ||||| || || || || || ||||| || || || ||
Sbjct 2566 TACCTTGGA-AAGACCTGTAAAGATGCGGTCATTACGGTGCCGGCATACTTCAACGATTC 2508
Query 550435 ACAACGTCAAGCTACTAAAGATGCTGG-ACGTATTGCTGGACTTAATGTTCTTCGTATTA 550493
|| || || || || |||||||| || ||| ||| | || | ||||| |||||||| |
Sbjct 2507 GCAGCGACAGGCAACGAAAGATGCGGGTACG-ATTTCGGGGTTGAATGTGCTTCGTATCA 2449
Query 550494 TCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAA 550537
| || || |||||||||||||| | |||||||| | ||||||
Sbjct 2448 TTAACGAGCCTACTGCTGCTGCCATCGCATATGGTTTGGATAAA 2405
Score = 86.0 bits (94), Expect = 5e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566
|| || || |||||||| || || ||||| |||||||| ||||| ||||||||||||||
Sbjct 1318 GGAATCCCACCTGCTCCGCGAGGTGTACCTCAAATTGAGGTTACATTCGATATCGATGCT 1259
Query 552567 AATGGAATTTTGAATGTGACTGCTTGTGATAA 552598
|| || || |||||||| |||| ||||||
Sbjct 1258 AACGGTATATTGAATGTTGCTGCAGTTGATAA 1227
>seq259
Length=51451
Score = 100 bits (110), Expect = 2e-15
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394
|| ||||||||||||| |||||||||||| ||||||||||||||||| ||||| ||| |
Sbjct 12244 CCAGCAAAAATAAGTCGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATCTTTGCT 12185
Query 563395 TTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGA 563454
|| || ||||| ||||| | | ||| | ||| | ||||| || || ||
Sbjct 12184 TTAACATTTTCAATGGTATCTGAAGGCTCGACTTCTAAAGTGATCGTTTTGCCTGTGAGG 12125
Query 563455 GTTTTAACGAAAATTTGCAT 563474
|| || ||||||||||||||
Sbjct 12124 GTCTTTACGAAAATTTGCAT 12105
Score = 95.1 bits (104), Expect = 1e-13
Identities = 107/141 (76%), Gaps = 2/141 (1%)
Strand=Plus/Minus
Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394
|| ||||| || | ||| ||||||||||| ||||||||||||||||| ||||||||| |
Sbjct 11392 CCTGCAAAGATTAATCTCTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATTTTTGCT 11333
Query 563395 TTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAG 563453
||||| || || ||||||| || || || | ||| | |||||||| || |
Sbjct 11332 TTTACGTTTTCGATCGTATCAGATGGCTCGAC-CTCCAAAGTTATTGTTTTACCCGTCAA 11274
Query 563454 AGTTTTAACGAAAATTTGCAT 563474
||||| |||||||| |||||
Sbjct 11273 GGTTTTGACGAAAATCTGCAT 11253
Score = 89.7 bits (98), Expect = 4e-12
Identities = 106/141 (75%), Gaps = 2/141 (1%)
Strand=Plus/Minus
Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394
|| ||||| || |||| ||||||||| ||||||||||| ||||| ||||||||||| |
Sbjct 11959 CCAGCAAAGATTAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAATTTTGGCT 11900
Query 563395 TTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAG 563453
|| || ||||| ||||| | || ||| || | ||| | ||| || || |||||
Sbjct 11899 TTGACATTTTCAATCGTATCTGATGGCTCTAC-CTCCAAAGTTATAGTCTTTCCTGTAAG 11841
Query 563454 AGTTTTAACGAAAATTTGCAT 563474
||||| || ||||| |||||
Sbjct 11840 GGTTTTGACAAAAATCTGCAT 11820
>seq65
Length=71031
Score = 96.9 bits (106), Expect = 3e-14
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 552439 TTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA 552498
|||| | |||||||||||| || | | || ||||| || ||| || |||| |||
Sbjct 32171 TTCAGGTCTTTGAAGGAGAACGACCAATGACGAAAGACAACCATCTTCTGGGTAAATTTG 32230
Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATA 552558
|| | || |||||||||||||| ||||| || || || |||||||||||||| || |
Sbjct 32231 ATCTGACTGGCATTCCTCCTGCTCCACGTGGTGTGCCACAGATTGAAGTTACTTTTGAAA 32290
Query 552559 TCGATGCCAATGGAATTTTGAATGTGACTGC 552589
|||||| || |||||| || | || || ||
Sbjct 32291 TCGATGTTAACGGAATTCTGCACGTAACCGC 32321
>seq4831
Length=15448
Score = 93.3 bits (102), Expect = 3e-13
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322
|| |||||||| | || ||||| |||||||||||| | |||||||| ||||
Sbjct 8671 AGAACAAGATGCAACGTGGACTCTTTCTGAATATTGTAATCCGATAGAGTTCGGCCATCT 8730
Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373
|| | ||||||||||||||||| | ||| ||||||||||| |||||||||
Sbjct 8731 TCTAACTGTTTTCCGGCAAAAATCAATCTCTGCTGATCAGGTGGAATTCCT 8781
>seq1606
Length=28750
Score = 91.5 bits (100), Expect = 1e-12
Identities = 116/158 (73%), Gaps = 4/158 (3%)
Strand=Plus/Plus
Query 428255 GTAAAGATATATCTTGCGCTTGCGGAATCTTTACCTCCTGACATTCTAGTTCCAAATTGT 428314
||||| |||||||| || || || || ||||| || || || || ||||||||| ||
Sbjct 8173 GTAAATATATATCTCGCACTAGCAGAGTCTTTGCCGCCCTGCAATCGAGTTCCAAACTGA 8232
Query 428315 CCATTAGGCATCAATAAATTAATATTATTACTTCCCACATAATTTTGGGCCATATTAACA 428374
|| | |||| || | ||| | |||||| || || ||| | ||||| |||| || |||
Sbjct 8233 CCGATTGGCAACAGCAGATTCAGATTATTGCTGCCAACAAAGTTTTGCGCCAAGTTCACA 8292
Query 428375 ATGGTACTAGTTAAGGATTG--TTCACCATGATGATAT 428410
|||||||| | | || || |||||| |||||||||
Sbjct 8293 ATGGTACTCATCA--GACTGACTTCACCGTGATGATAT 8328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4028114771584640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |