Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2467 102 6e-17 seq4831 82.4 6e-11 >seq2467 Length=23714 Score = 102 bits (112), Expect = 6e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 ||||| ||||| |||| || || ||||| | ||||| |||||||||||| || || Sbjct 9705 TTACCAGCAAAAATCAATCTTTGCTGATCAGGGGGAATGCCCTCCTTGTCTTGTATTTTA 9764 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 ||| ||| | | | ||||||| ||| ||||||| ||| || ||||||||||| Sbjct 9765 GCTTTAACATTTTCAATTGTGTCTGACGGCTCGACCTCCAGCGTGATAGTTTTTCCCGTT 9824 Query 48744 AAAGTTTTTACAAAAATCTGCATC 48767 |||||||| |||||||| |||||| Sbjct 9825 AAAGTTTTGACAAAAATTTGCATC 9848 >seq4831 Length=15448 Score = 82.4 bits (90), Expect = 6e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| | |||| |||||| |||||||||||||| |||||| |||| | || || ||||| Sbjct 8679 ATGCAACGTGGACTCTTTCTGAATATTGTAATCCGATAGAGTTCGGCCATCTTCTAACTG 8738 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAA 48660 || |||||||| |||| || ||| ||||| | |||| Sbjct 8739 TTTTCCGGCAAAAATCAATCTCTGCTGATCAGGTGGAA 8776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380833901166528