Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq7623 149 4e-30 seq65 120 2e-21 seq259 107 1e-17 seq2467 104 2e-16 >seq7623 Length=9951 Score = 149 bits (164), Expect = 4e-30 Identities = 241/339 (71%), Gaps = 12/339 (4%) Strand=Plus/Minus Query 474544 TTTTGATGATACCACTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGT 474603 |||||| ||| || |||| |||||||| ||| || ||||| || ||||| ||||||| Sbjct 2735 TTTTGAGGATGCCCCTGTACAATCTGACATGAAACACTGGCCGTTCAAGGTTATAAATGA 2676 Query 474604 TGGTGGTAAACCATATATAGAAGC--AATACACGCAGGTGAAACTAAACAATTTTCACCG 474661 || |||||||| | | | | |||||| | || ||||| ||| ||| |||| Sbjct 2675 CGGCGGTAAACCCAAGGTGCAGGTTGAATACAAG--GGCGAAACGAAAACTTTTACACCT 2618 Query 474662 GAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCG--AGCTCATATCTTG 474719 ||| |||| ||||||| || | |||||||| | || ||| |||| || |||| Sbjct 2617 GAAGAAATCAGCGCAATGGTGTTGACAAAAATGAAGGAGACTGCGGAAGCT--TACCTTG 2560 Query 474720 GACAAGAA--GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACG 474777 || |||| |||| ||||| || ||||| || || ||||| || || ||||| || || Sbjct 2559 GA-AAGACCTGTAAA-GATGCGGTCATTACGGTGCCGGCATACTTCAACGATTCGCAGCG 2502 Query 474778 TCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGA 474837 || ||||| ||||||||||| | ||| | || | ||||| | ||||| ||||| || Sbjct 2501 ACAGGCAACGAAAGATGCGGGTACGATTTCGGGGTTGAATGTGCTTCGTATCATTAACGA 2442 Query 474838 ACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 || || || || || | || |||||| | ||||| || Sbjct 2441 GCCTACTGCTGCTGCCATCGCATATGGTTTGGATAAAAA 2403 >seq65 Length=71031 Score = 120 bits (132), Expect = 2e-21 Identities = 322/478 (67%), Gaps = 27/478 (6%) Strand=Plus/Plus Query 474378 AAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATG 474437 ||||||| | |||||| || || || || ||||| || || | | || || ||||| | Sbjct 29727 AAAATGGCAGAGTAGAGATCATAGCTAACGACCAGGGAAACCGGATCACTCCTTCATACG 29786 Query 474438 TTTCTTTTACT---GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTG-CA 474493 || | || ||| ||| |||| | | | ||||||||||| ||| ||||| ||| || Sbjct 29787 TTGCATTCACTCCTGAAGGCGAACGTTTGGTCGGAGATGCTGCCAAAAATCAA-CTGACA 29845 Query 474494 TCTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGAT 474553 |||||| | || || |||| |||| |||||| | ||||||| | | || || Sbjct 29846 ATTAATCCAGAAAACACAGTTTTCGATGTAAAAAGAATTCTTGGTCGAAGCTGGGAAGAC 29905 Query 474554 ACC--ACTGTCCAATCTGATATGCGTCATTGGCCTTTTA-AGGTGATAAATGTTGGTGGT 474610 | |||| ||| ||| | ||||||||||| | || ||||||| || Sbjct 29906 AAAGAACTG--CAAAATGACAGAAAACATTGGCCTTTCACAGTTGATAAAAAG----GGA 29959 Query 474611 AAACCATATATAGAAGCAATACACGCAGGTGAAA----CT--AAACAATTTT-CACCGGA 474663 ||| || | ||| | | | ||| ||| || ||| | |||| | || || Sbjct 29960 AAATCAGTT---GAAATTAAAGTTTC-GGTCAAAGGCGCTTCAAAAACTTTTGCGCCAGA 30015 Query 474664 ACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCA-TATCTTGGAC 474722 ||| ||||| | ||||| |||| |||||||| |||| || | || |||||||| | Sbjct 30016 ACAGATTTCAGCCATGGTATTAGAGAAAATGAAGGAAACAGCC-GAACAGTATCTTGGCC 30074 Query 474723 AAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAG 474782 | | || || |||| || ||||||||||| ||||| || || ||| | || | || | Sbjct 30075 AGAACGTTACGCATGCTGTTATTACTGTTCCTGCATACTTCAACGATGCGCAGAGACAGG 30134 Query 474783 CAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACC 474840 | || || || || || | ||| ||||| || | |||||| |||||||| || ||||| Sbjct 30135 CGACGAAGGACGCTGGTACAATAGCAGGACTCACTGTTTTGCGTATTATAAACGAACC 30192 >seq259 Length=51451 Score = 107 bits (118), Expect = 1e-17 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 |||||||||||||| ||||| |||||||| ||||||||||| || || ||||||||| | Sbjct 12244 CCAGCAAAAATAAGTCGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATCTTTGCT 12185 Query 480693 TTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGA 480752 || ||| |||||| ||||| | | ||| | || || ||||| || ||||| Sbjct 12184 TTAACATTTTCAATGGTATCTGAAGGCTCGACTTCTAAAGTGATCGTTTTGCCTGTGAGG 12125 Query 480753 GTCTTAACGAAAATTTG 480769 ||||| ||||||||||| Sbjct 12124 GTCTTTACGAAAATTTG 12108 Score = 95.1 bits (104), Expect = 8e-14 Identities = 110/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 ||| ||| || ||||||||||| | |||||||| |||||||| ||||| || || |||| Sbjct 12823 GTTCCTTACCTGCAAAAATAAGTCTCTGTTGATCCGGAGGAATCCCTTCTTTATCCTGAA 12764 Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTA 480743 |||| || ||| |||||| || || | || | || || ||| |||||| || || Sbjct 12763 TCTTCGCCTTAACATTTTCAATCGTGTCCGATGCTTCAACTTCCAA-GGTAATTGTCTTG 12705 Query 480744 CCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| || |||||||| Sbjct 12704 CCTGTAAGCGTCTTGACAAAAATTTG 12679 Score = 93.3 bits (102), Expect = 3e-13 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 || ||||| || | || || ||||| ||||| |||||||| |||||||||||||| | Sbjct 12537 CCTGCAAATATTAAGCGCTGCTGATCGGGAGGGATTCCTTCTTTGTCTTGAATCTTGGCT 12478 Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || || |||||| ||||||| || | || || |||||||||| || || ||||| || Sbjct 12477 TTCACGTTTTCAATGGTATCAGATGGCTCAACTT-CAAGGGTAATCGTCTTGCCGGTCAG 12419 Query 480752 AGTCTTAACGAAAATTTG 480769 || || ||||| || || Sbjct 12418 GGTTTTGACGAATATCTG 12401 Score = 87.8 bits (96), Expect = 1e-11 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 480626 TTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAAT 480685 |||| | |||||||| || || ||||| ||||| ||||||||||| || ||||||||||| Sbjct 11966 TTGCATACCAGCAAAGATTAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAAT 11907 Query 480686 CTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTAC 480744 || ||||||| |||||| ||||| | || | | | ||| || ||||| || | Sbjct 11906 TTTGGCTTTGACATTTTCAATCGTATCTGATGGCTCTACCTCCAA-AGTTATAGTCTTTC 11848 Query 480745 CGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || || ||||| || Sbjct 11847 CTGTAAGGGTTTTGACAAAAATCTG 11823 >seq2467 Length=23714 Score = 104 bits (114), Expect = 2e-16 Identities = 103/132 (78%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 480638 AAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGAC 480697 |||| |||| || ||||||||||||||||||||||| ||||||||||||||| || || Sbjct 9420 AAAATTAAG-CGCTGTTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCCTTAAC 9478 Query 480698 AGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTT 480757 ||| || ||||||| || |||||| || || || || || ||||| ||||| Sbjct 9479 GTTTTCTATCGTATCAGATGGTTCCACTTCAAGCGTTATCGTCTTGCCCGTGAGGGTCTT 9538 Query 480758 AACGAAAATTTG 480769 ||||||||||| Sbjct 9539 CACGAAAATTTG 9550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267221100585728