Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12]
22,336 sequences; 218,332,512 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq7623 149 4e-30
seq65 120 2e-21
seq259 107 1e-17
seq2467 104 2e-16
>seq7623
Length=9951
Score = 149 bits (164), Expect = 4e-30
Identities = 241/339 (71%), Gaps = 12/339 (4%)
Strand=Plus/Minus
Query 474544 TTTTGATGATACCACTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGT 474603
|||||| ||| || |||| |||||||| ||| || ||||| || ||||| |||||||
Sbjct 2735 TTTTGAGGATGCCCCTGTACAATCTGACATGAAACACTGGCCGTTCAAGGTTATAAATGA 2676
Query 474604 TGGTGGTAAACCATATATAGAAGC--AATACACGCAGGTGAAACTAAACAATTTTCACCG 474661
|| |||||||| | | | | |||||| | || ||||| ||| ||| ||||
Sbjct 2675 CGGCGGTAAACCCAAGGTGCAGGTTGAATACAAG--GGCGAAACGAAAACTTTTACACCT 2618
Query 474662 GAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCG--AGCTCATATCTTG 474719
||| |||| ||||||| || | |||||||| | || ||| |||| || ||||
Sbjct 2617 GAAGAAATCAGCGCAATGGTGTTGACAAAAATGAAGGAGACTGCGGAAGCT--TACCTTG 2560
Query 474720 GACAAGAA--GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACG 474777
|| |||| |||| ||||| || ||||| || || ||||| || || ||||| || ||
Sbjct 2559 GA-AAGACCTGTAAA-GATGCGGTCATTACGGTGCCGGCATACTTCAACGATTCGCAGCG 2502
Query 474778 TCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGA 474837
|| ||||| ||||||||||| | ||| | || | ||||| | ||||| ||||| ||
Sbjct 2501 ACAGGCAACGAAAGATGCGGGTACGATTTCGGGGTTGAATGTGCTTCGTATCATTAACGA 2442
Query 474838 ACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876
|| || || || || | || |||||| | ||||| ||
Sbjct 2441 GCCTACTGCTGCTGCCATCGCATATGGTTTGGATAAAAA 2403
>seq65
Length=71031
Score = 120 bits (132), Expect = 2e-21
Identities = 322/478 (67%), Gaps = 27/478 (6%)
Strand=Plus/Plus
Query 474378 AAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATG 474437
||||||| | |||||| || || || || ||||| || || | | || || ||||| |
Sbjct 29727 AAAATGGCAGAGTAGAGATCATAGCTAACGACCAGGGAAACCGGATCACTCCTTCATACG 29786
Query 474438 TTTCTTTTACT---GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTG-CA 474493
|| | || ||| ||| |||| | | | ||||||||||| ||| ||||| ||| ||
Sbjct 29787 TTGCATTCACTCCTGAAGGCGAACGTTTGGTCGGAGATGCTGCCAAAAATCAA-CTGACA 29845
Query 474494 TCTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGAT 474553
|||||| | || || |||| |||| |||||| | ||||||| | | || ||
Sbjct 29846 ATTAATCCAGAAAACACAGTTTTCGATGTAAAAAGAATTCTTGGTCGAAGCTGGGAAGAC 29905
Query 474554 ACC--ACTGTCCAATCTGATATGCGTCATTGGCCTTTTA-AGGTGATAAATGTTGGTGGT 474610
| |||| ||| ||| | ||||||||||| | || ||||||| ||
Sbjct 29906 AAAGAACTG--CAAAATGACAGAAAACATTGGCCTTTCACAGTTGATAAAAAG----GGA 29959
Query 474611 AAACCATATATAGAAGCAATACACGCAGGTGAAA----CT--AAACAATTTT-CACCGGA 474663
||| || | ||| | | | ||| ||| || ||| | |||| | || ||
Sbjct 29960 AAATCAGTT---GAAATTAAAGTTTC-GGTCAAAGGCGCTTCAAAAACTTTTGCGCCAGA 30015
Query 474664 ACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCA-TATCTTGGAC 474722
||| ||||| | ||||| |||| |||||||| |||| || | || |||||||| |
Sbjct 30016 ACAGATTTCAGCCATGGTATTAGAGAAAATGAAGGAAACAGCC-GAACAGTATCTTGGCC 30074
Query 474723 AAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAG 474782
| | || || |||| || ||||||||||| ||||| || || ||| | || | || |
Sbjct 30075 AGAACGTTACGCATGCTGTTATTACTGTTCCTGCATACTTCAACGATGCGCAGAGACAGG 30134
Query 474783 CAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACC 474840
| || || || || || | ||| ||||| || | |||||| |||||||| || |||||
Sbjct 30135 CGACGAAGGACGCTGGTACAATAGCAGGACTCACTGTTTTGCGTATTATAAACGAACC 30192
>seq259
Length=51451
Score = 107 bits (118), Expect = 1e-17
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692
|||||||||||||| ||||| |||||||| ||||||||||| || || ||||||||| |
Sbjct 12244 CCAGCAAAAATAAGTCGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATCTTTGCT 12185
Query 480693 TTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGA 480752
|| ||| |||||| ||||| | | ||| | || || ||||| || |||||
Sbjct 12184 TTAACATTTTCAATGGTATCTGAAGGCTCGACTTCTAAAGTGATCGTTTTGCCTGTGAGG 12125
Query 480753 GTCTTAACGAAAATTTG 480769
||||| |||||||||||
Sbjct 12124 GTCTTTACGAAAATTTG 12108
Score = 95.1 bits (104), Expect = 8e-14
Identities = 110/146 (75%), Gaps = 2/146 (1%)
Strand=Plus/Minus
Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684
||| ||| || ||||||||||| | |||||||| |||||||| ||||| || || ||||
Sbjct 12823 GTTCCTTACCTGCAAAAATAAGTCTCTGTTGATCCGGAGGAATCCCTTCTTTATCCTGAA 12764
Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTA 480743
|||| || ||| |||||| || || | || | || || ||| |||||| || ||
Sbjct 12763 TCTTCGCCTTAACATTTTCAATCGTGTCCGATGCTTCAACTTCCAA-GGTAATTGTCTTG 12705
Query 480744 CCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || ||||| || ||||||||
Sbjct 12704 CCTGTAAGCGTCTTGACAAAAATTTG 12679
Score = 93.3 bits (102), Expect = 3e-13
Identities = 105/138 (76%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692
|| ||||| || | || || ||||| ||||| |||||||| |||||||||||||| |
Sbjct 12537 CCTGCAAATATTAAGCGCTGCTGATCGGGAGGGATTCCTTCTTTGTCTTGAATCTTGGCT 12478
Query 480693 TTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751
|| || |||||| ||||||| || | || || |||||||||| || || ||||| ||
Sbjct 12477 TTCACGTTTTCAATGGTATCAGATGGCTCAACTT-CAAGGGTAATCGTCTTGCCGGTCAG 12419
Query 480752 AGTCTTAACGAAAATTTG 480769
|| || ||||| || ||
Sbjct 12418 GGTTTTGACGAATATCTG 12401
Score = 87.8 bits (96), Expect = 1e-11
Identities = 108/145 (74%), Gaps = 2/145 (1%)
Strand=Plus/Minus
Query 480626 TTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAAT 480685
|||| | |||||||| || || ||||| ||||| ||||||||||| || |||||||||||
Sbjct 11966 TTGCATACCAGCAAAGATTAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAAT 11907
Query 480686 CTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTAC 480744
|| ||||||| |||||| ||||| | || | | | ||| || ||||| || |
Sbjct 11906 TTTGGCTTTGACATTTTCAATCGTATCTGATGGCTCTACCTCCAA-AGTTATAGTCTTTC 11848
Query 480745 CGGTGAGAGTCTTAACGAAAATTTG 480769
| || || || || || ||||| ||
Sbjct 11847 CTGTAAGGGTTTTGACAAAAATCTG 11823
>seq2467
Length=23714
Score = 104 bits (114), Expect = 2e-16
Identities = 103/132 (78%), Gaps = 1/132 (1%)
Strand=Plus/Plus
Query 480638 AAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGAC 480697
|||| |||| || ||||||||||||||||||||||| ||||||||||||||| || ||
Sbjct 9420 AAAATTAAG-CGCTGTTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCCTTAAC 9478
Query 480698 AGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTT 480757
||| || ||||||| || |||||| || || || || || ||||| |||||
Sbjct 9479 GTTTTCTATCGTATCAGATGGTTCCACTTCAAGCGTTATCGTCTTGCCCGTGAGGGTCTT 9538
Query 480758 AACGAAAATTTG 480769
|||||||||||
Sbjct 9539 CACGAAAATTTG 9550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3267221100585728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |