Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12]
22,336 sequences; 218,332,512 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq259 118 2e-21
seq2467 116 7e-21
seq4831 98.7 2e-15
seq1945 95.1 2e-14
>seq259
Length=51451
Score = 118 bits (130), Expect = 2e-21
Identities = 110/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 193221 CCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTT 193280
|| |||||||| | || || |||||||| || |||||||||||||| || || || | |
Sbjct 12244 CCAGCAAAAATAAGTCGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATCTTTGCT 12185
Query 193281 TTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340
|| | |||| ||| ||||| |||| ||| ||||||| ||| || ||||| ||||| ||
Sbjct 12184 TTAACATTTTCAATGGTATCTGAAGGCTCGACTTCTAAAGTGATCGTTTTGCCTGTGAGG 12125
Query 193341 GTTTTTACAAATATTTGCAT 193360
|| ||||| || ||||||||
Sbjct 12124 GTCTTTACGAAAATTTGCAT 12105
Score = 114 bits (126), Expect = 2e-20
Identities = 110/141 (78%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 193221 CCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTT 193280
|| ||||| ||||||||||| |||||||| || |||||||||||||| || ||||| | |
Sbjct 11392 CCTGCAAAGATTAATCTCTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATTTTTGCT 11333
Query 193281 TTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340
|||| ||| || ||||| || | ||| || || | |||||| |||||||| || |
Sbjct 11332 TTTACGTTTTCGATCGTATCAGATGGCTCGACCTCCAAAGTTATTGTTTTACCCGTCAAG 11273
Query 193341 GTTTTTACAAATATTTGCATT 193361
||||| || || || ||||||
Sbjct 11272 GTTTTGACGAAAATCTGCATT 11252
Score = 109 bits (120), Expect = 1e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 193221 CCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTT 193280
|| ||||| ||||| | ||| ||||| ||||| ||||||||||| ||||| || |||| |
Sbjct 12537 CCTGCAAATATTAAGCGCTGCTGATCGGGAGGGATTCCTTCTTTGTCTTGAATCTTGGCT 12478
Query 193281 TTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340
|| | ||| ||| ||||| || | ||||||||| || || || || || || || ||
Sbjct 12477 TTCACGTTTTCAATGGTATCAGATGGCTCAACTTCAAGGGTAATCGTCTTGCCGGTCAGG 12418
Query 193341 GTTTTTACAAATATTTGCAT 193360
||||| || ||||| |||||
Sbjct 12417 GTTTTGACGAATATCTGCAT 12398
Score = 107 bits (118), Expect = 3e-18
Identities = 110/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 193218 TTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTG 193277
|| || |||||||| | |||||||||||| ||||| || ||||||||||| || || ||
Sbjct 12818 TTACCTGCAAAAATAAGTCTCTGTTGATCCGGAGGAATCCCTTCTTTATCCTGAATCTTC 12759
Query 193278 GTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTT 193337
| || | |||| ||| || || || | |||||||| | || || || || |||||
Sbjct 12758 GCCTTAACATTTTCAATCGTGTCCGATGCTTCAACTTCCAAGGTAATTGTCTTGCCTGTA 12699
Query 193338 AGCGTTTTTACAAATATTTGCATT 193361
||||| || ||||| |||||||||
Sbjct 12698 AGCGTCTTGACAAAAATTTGCATT 12675
Score = 84.2 bits (92), Expect = 4e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 193221 CCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTT 193280
|| ||||| |||| || |||||||||||| || || || ||||| || || || || |
Sbjct 13096 CCAGCAAATATTAGTCGCTGTTGATCAGGTGGAATGCCCTCTTTGTCCTGAATCTTTGCC 13037
Query 193281 TTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340
|| | ||| || || || || | ||| || || | |||||||| || || || ||
Sbjct 13036 TTCACGTTTTCGATTGTGTCAGACGGCTCGACCTCCAATGTTATAGTCTTGCCAGTAAGA 12977
Query 193341 GTTTTTACAAATATTTGCATT 193361
||||| || ||||||||||||
Sbjct 12976 GTTTTAACGAATATTTGCATT 12956
>seq2467
Length=23714
Score = 116 bits (128), Expect = 7e-21
Identities = 118/154 (77%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 193207 CGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTAT 193266
|||||| || || || |||||||| ||||| || |||||||| || || || || || |
Sbjct 9694 CGTCTATTTAATTACCAGCAAAAATCAATCTTTGCTGATCAGGGGGAATGCCCTCCTTGT 9753
Query 193267 CTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAG 193326
|||||||||| | ||| | |||| ||| || || || | ||| || || || || ||||
Sbjct 9754 CTTGTATTTTAGCTTTAACATTTTCAATTGTGTCTGACGGCTCGACCTCCAGCGTGATAG 9813
Query 193327 TTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||| || |||| ||||| ||||| ||||||||
Sbjct 9814 TTTTTCCCGTTAAAGTTTTGACAAAAATTTGCAT 9847
Score = 102 bits (112), Expect = 1e-16
Identities = 107/141 (76%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 193221 CCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTT 193280
|| || || || || |||||||||||||| || || || || || ||||| ||||| |
Sbjct 9135 CCAGCGAATATCAACCTCTGTTGATCAGGTGGAATGCCCTCCTTGTCTTGAATTTTAGCC 9194
Query 193281 TTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340
|||| ||| ||| ||||| || | ||| || || | || ||||| || || || |||
Sbjct 9195 TTTACGTTTTCAATTGTATCCGACGGCTCTACCTCCAACGTAATAGTCTTGCCGGTGAGC 9254
Query 193341 GTTTTTACAAATATTTGCATT 193361
||||| |||||||||||||||
Sbjct 9255 GTTTTGACAAATATTTGCATT 9275
Score = 100 bits (110), Expect = 5e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 193221 CCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTT 193280
||||||||||| |||| || ||||| |||||||| |||||||| || || || || | |
Sbjct 9990 CCGGCAAAAATCAATCGTTGCTGATCCGGAGGTATCCCTTCTTTGTCCTGAATCTTCGCT 10049
Query 193281 TTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340
|| | |||| ||| || || || | |||||||| | ||| |||||||| || || |
Sbjct 10050 TTAACATTTTCAATCGTGTCCGATGGTTCAACTTCCAAAGTAATAGTTTTTCCAGTCAAT 10109
Query 193341 GTTTTTACAAATATTTGCAT 193360
|| || || ||||| |||||
Sbjct 10110 GTCTTGACGAATATCTGCAT 10129
Score = 95.1 bits (104), Expect = 2e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 193221 CCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTT 193280
|| || |||||||| | ||||||||||||||| ||||||||||| ||||| || || |
Sbjct 9414 CCTGCGAAAATTAAGCGCTGTTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCC 9473
Query 193281 TTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340
|| | ||| || ||||| || | || ||||| || ||||| || || || || ||
Sbjct 9474 TTAACGTTTTCTATCGTATCAGATGGTTCCACTTCAAGCGTTATCGTCTTGCCCGTGAGG 9533
Query 193341 GTTTTTACAAATATTTGCAT 193360
|| || || || ||||||||
Sbjct 9534 GTCTTCACGAAAATTTGCAT 9553
Score = 87.8 bits (96), Expect = 3e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 193218 TTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTG 193277
|| || || || ||||| | ||| |||||||| || ||||||||||| || || || |||
Sbjct 10548 TTGCCTGCGAAGATTAAGCGCTGCTGATCAGGTGGGATTCCTTCTTTGTCCTGGATCTTG 10607
Query 193278 GTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTT 193337
| || | ||| || ||||| || | ||||||||| | ||| || || || || ||
Sbjct 10608 GCCTTGACGTTTTCGATCGTATCAGACGGCTCAACTTCCAAAGTAATCGTCTTTCCGGTC 10667
Query 193338 AGCGTTTTTACAAATATTTGCAT 193360
|| ||||| || || || |||||
Sbjct 10668 AGAGTTTTAACGAAGATCTGCAT 10690
>seq4831
Length=15448
Score = 98.7 bits (108), Expect = 2e-15
Identities = 89/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 193148 AAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATC 193207
||| || |||||||| || | |||||| |||||| || || |||| |||| |||
Sbjct 8670 AAGAACAAGATGCAACGTGGACTCTTTCTGAATATTGTAATCCGATAGAGTTCGGCCATC 8729
Query 193208 GTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCT 193259
||||| ||||||||||||||||| |||||||| |||||||| || ||||||
Sbjct 8730 TTCTAACTGTTTTCCGGCAAAAATCAATCTCTGCTGATCAGGTGGAATTCCT 8781
>seq1945
Length=26447
Score = 95.1 bits (104), Expect = 2e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313
|| |||||||||||||| ||||||| || | |||| || ||||| |||| ||| ||
Sbjct 13464 ATACCTTCTTTATCTTGAATTTTGGACTTCACATTTTCGATCGTATCTGAAGGCTCTACC 13523
Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||| || |||||||| || ||||||||||| || ||||| |||||
Sbjct 13524 TCTAACGTAATAGTTTTGCCGGTTAGCGTTTTCACGAATATCTGCAT 13570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899403216491520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |