Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq259 114 3e-20 seq2467 100 6e-16 >seq259 Length=51451 Score = 114 bits (126), Expect = 3e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||| ||||||||||||||||| ||||||||||| |||||||||||||| || ||||| Sbjct 11394 TACCTGCAAAGATTAATCTCTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATTTTTG 11335 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 |||||| || || | ||| || | || || || | ||| || |||||||| || | Sbjct 11334 CTTTTACGTTTTCGATCGTATCAGATGGCTCGACCTCCAAAGTTATTGTTTTACCCGTCA 11275 Query 192515 ATGTTTTAATAAATATCTGCATT 192537 | ||||| | || ||||||||| Sbjct 11274 AGGTTTTGACGAAAATCTGCATT 11252 Score = 91.5 bits (100), Expect = 3e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 192389 ATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTA 192448 |||| ||||||||||||||| || || ||||| || || ||||| ||||| ||||| | Sbjct 11967 ATTGCATACCAGCAAAGATTAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAA 11908 Query 192449 TTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTAC 192508 |||| ||| ||||| || | |||||| | ||||| || | ||| || || || | Sbjct 11907 TTTTGGCTTTGACATTTTCAATCGTATCTGATGGCTCTACCTCCAAAGTTATAGTCTTTC 11848 Query 192509 CAGTTAATGTTTTAATAAATATCTGCAT 192536 | || | ||||| | ||| |||||||| Sbjct 11847 CTGTAAGGGTTTTGACAAAAATCTGCAT 11820 Score = 86.0 bits (94), Expect = 1e-11 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||||||||| || | || || ||||||||||| |||||||||||||| || || || Sbjct 12246 TACCAGCAAAAATAAGTCGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATCTTTG 12187 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 ||| ||||| || | |||||| | || ||||||| ||| || ||||| || || | Sbjct 12186 CTTTAACATTTTCAATGGTATCTGAAGGCTCGACTTCTAAAGTGATCGTTTTGCCTGTGA 12127 Query 192515 ATGTTTTAATAAATATCTGCAT 192536 || || | || || ||||| Sbjct 12126 GGGTCTTTACGAAAATTTGCAT 12105 >seq2467 Length=23714 Score = 100 bits (110), Expect = 6e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 192394 TTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 192453 ||||||||||| || ||||| || |||||||| || || || || || |||||||||||| Sbjct 9705 TTACCAGCAAAAATCAATCTTTGCTGATCAGGGGGAATGCCCTCCTTGTCTTGTATTTTA 9764 Query 192454 TTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 192513 ||| ||||| || | ||||||| || || || || || || ||||| || ||| Sbjct 9765 GCTTTAACATTTTCAATTGTGTCTGACGGCTCGACCTCCAGCGTGATAGTTTTTCCCGTT 9824 Query 192514 AATGTTTTAATAAATATCTGCAT 192536 || ||||| | ||| || ||||| Sbjct 9825 AAAGTTTTGACAAAAATTTGCAT 9847 Score = 91.5 bits (100), Expect = 3e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||| ||||| || || | ||||||||| || || || |||||||| ||||| ||||| Sbjct 10840 TACCTGCAAAAATCAAGCGCTGTTGATCGGGAGGGATGCCTTCTTTGTCTTGAATTTTCG 10899 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 ||||| || || | || || | ||| ||||||| ||||| |||||||| || | Sbjct 10900 CCTTTACGTTTTCGATCGTGTCAGAAGGTTCCACTTCTAACGTAATTGTTTTACCCGTCA 10959 Query 192515 ATGTTTTAATAAATATCTGCATTTT 192539 | || || | || ||||||||||| Sbjct 10960 ACGTCTTTACGAAGATCTGCATTTT 10984 Score = 89.7 bits (98), Expect = 1e-12 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 192396 ACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATT 192455 |||||| || || || ||||||||||||||||| || || || || ||||| |||||| Sbjct 9134 ACCAGCGAATATCAACCTCTGTTGATCAGGTGGAATGCCCTCCTTGTCTTGAATTTTAGC 9193 Query 192456 TTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAA 192515 ||||| || || | ||| |||| ||||| || | ||||| || || || || | Sbjct 9194 CTTTACGTTTTCAATTGTATCCGACGGCTCTACCTCCAACGTAATAGTCTTGCCGGTGAG 9253 Query 192516 TGTTTTAATAAATATCTGCATT 192537 ||||| | |||||| |||||| Sbjct 9254 CGTTTTGACAAATATTTGCATT 9275 Score = 89.7 bits (98), Expect = 1e-12 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||| ||||| || |||| || ||||| || ||||| |||||||| || || || || Sbjct 9988 TACCGGCAAAAATCAATCGTTGCTGATCCGGAGGTATCCCTTCTTTGTCCTGAATCTTCG 10047 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 ||| ||||| || | || || | ||| ||||| | |||||| ||||| ||||| | Sbjct 10048 CTTTAACATTTTCAATCGTGTCCGATGGTTCAACTTCCAAAGTAATAGTTTTTCCAGTCA 10107 Query 192515 ATGTTTTAATAAATATCTGCAT 192536 |||| || | ||||||||||| Sbjct 10108 ATGTCTTGACGAATATCTGCAT 10129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984198261513600