Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq259 114 2e-20 seq2467 100 5e-16 >seq259 Length=51451 Score = 114 bits (126), Expect = 2e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 |||| ||||| ||||||||||| || |||||||| |||||||||||||| || ||||| Sbjct 11394 TACCTGCAAAGATTAATCTCTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATTTTTG 11335 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 |||||| || || ||||| || | || || || | ||| || |||||||| || | Sbjct 11334 CTTTTACGTTTTCGATCGTATCAGATGGCTCGACCTCCAAAGTTATTGTTTTACCCGTCA 11275 Query 172048 ATGTTTTAATGAATATCTGCATT 172070 | ||||| | ||| ||||||||| Sbjct 11274 AGGTTTTGACGAAAATCTGCATT 11252 Score = 95.1 bits (104), Expect = 2e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 ||||||||||||| | || || || |||||||| |||||||||||||| || || || Sbjct 12246 TACCAGCAAAAATAAGTCGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATCTTTG 12187 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 ||| ||||| || |||||||| | || ||||||| ||| || ||||| || || | Sbjct 12186 CTTTAACATTTTCAATGGTATCTGAAGGCTCGACTTCTAAAGTGATCGTTTTGCCTGTGA 12127 Query 172048 ATGTTTTAATGAATATCTGCAT 172069 || || | ||| || ||||| Sbjct 12126 GGGTCTTTACGAAAATTTGCAT 12105 Score = 86.0 bits (94), Expect = 1e-11 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 |||| ||||| ||||| | ||| || || || || ||||||||||| ||||| || || Sbjct 12539 TACCTGCAAATATTAAGCGCTGCTGATCGGGAGGGATTCCTTCTTTGTCTTGAATCTTGG 12480 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 ||| || || || ||||| || | || ||||| || ||||| || || || || | Sbjct 12479 CTTTCACGTTTTCAATGGTATCAGATGGCTCAACTTCAAGGGTAATCGTCTTGCCGGTCA 12420 Query 172048 ATGTTTTAATGAATATCTGCAT 172069 ||||| | |||||||||||| Sbjct 12419 GGGTTTTGACGAATATCTGCAT 12398 >seq2467 Length=23714 Score = 100 bits (110), Expect = 5e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171927 TTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 171986 |||||||||||||| ||||| || || ||||| || || || || || |||||||||||| Sbjct 9705 TTACCAGCAAAAATCAATCTTTGCTGATCAGGGGGAATGCCCTCCTTGTCTTGTATTTTA 9764 Query 171987 TTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 172046 ||| ||||| || || ||||||| || || || || || || ||||| || ||| Sbjct 9765 GCTTTAACATTTTCAATTGTGTCTGACGGCTCGACCTCCAGCGTGATAGTTTTTCCCGTT 9824 Query 172047 AATGTTTTAATGAATATCTGCAT 172069 || ||||| | || || ||||| Sbjct 9825 AAAGTTTTGACAAAAATTTGCAT 9847 Score = 100 bits (110), Expect = 5e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 |||| |||||||| || | |||||| || || || || |||||||| ||||| ||||| Sbjct 10840 TACCTGCAAAAATCAAGCGCTGTTGATCGGGAGGGATGCCTTCTTTGTCTTGAATTTTCG 10899 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 ||||| || || || || || | ||| ||||||| ||||| |||||||| || | Sbjct 10900 CCTTTACGTTTTCGATCGTGTCAGAAGGTTCCACTTCTAACGTAATTGTTTTACCCGTCA 10959 Query 172048 ATGTTTTAATGAATATCTGCATTTT 172072 | || || | ||| ||||||||||| Sbjct 10960 ACGTCTTTACGAAGATCTGCATTTT 10984 Score = 98.7 bits (108), Expect = 2e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 |||| |||||||| |||| || || || || ||||| |||||||| || || || || Sbjct 9988 TACCGGCAAAAATCAATCGTTGCTGATCCGGAGGTATCCCTTCTTTGTCCTGAATCTTCG 10047 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 ||| ||||| || || || || | ||| ||||| | |||||| ||||| ||||| | Sbjct 10048 CTTTAACATTTTCAATCGTGTCCGATGGTTCAACTTCCAAAGTAATAGTTTTTCCAGTCA 10107 Query 172048 ATGTTTTAATGAATATCTGCAT 172069 |||| || | |||||||||||| Sbjct 10108 ATGTCTTGACGAATATCTGCAT 10129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904883286028800