Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5314 104 7e-17 seq7762 86.0 2e-11 >seq5314 Length=14302 Score = 104 bits (114), Expect = 7e-17 Identities = 236/351 (67%), Gaps = 8/351 (2%) Strand=Plus/Plus Query 133291 AGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATAT 133350 ||||||||| | ||||| || |||||| || | |||||||| |||||||||| Sbjct 5357 AGAAGTTCAGGCGCTGGAAGCGCGATACTTTTACGGCTTTCAGATTGCACTGGAAAATAT 5416 Query 133351 CCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCA 133410 |||||| | ||||| || || ||| ||||||||||| | ||| || | | | Sbjct 5417 ACATTCTGAGATGTATTCGTTACTTATCGATGCTTACATCAAAAACCCCGCTCAAAGGGA 5476 Query 133411 CAAACTATTCAACGCCATTAGCGAA---TTTCCTTGTATTAAAAAGAAATCTGACTGGGC 133467 || ||||||||| | |||| | || ||| | || |||||| | |||||||| Sbjct 5477 GTTGCTGTTCAACGCCGT---CGAAACGCTGCCGTGTGTGAAGAAGAAAGCAGACTGGGC 5533 Query 133468 TATTAAATGGATCCA-GGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTG 133526 | | ||||||||| || || || | ||||||| || || ||||| || ||| Sbjct 5534 GTTGAGATGGATCCACGGGAAATCG-ACACCTTTTGCTGAACGCCTTGTTGCCTTCTCTG 5592 Query 133527 TAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTG 133586 || || || ||||||||||| || ||| |||| |||||| | || || |||| Sbjct 5593 CCGTCGAAGGTATTTTTTTCAGCGGCAGCTTCGCGGCTATATTTTGGTTGAAGAAACGTG 5652 Query 133587 GTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGG 133637 || || | || || | || |||||||| || ||| | ||||||| Sbjct 5653 GTCTTATGCCGGGTTTAACGTTCAGCAACGAACTCATATCACGCGACGAGG 5703 >seq7762 Length=9784 Score = 86.0 bits (94), Expect = 2e-11 Identities = 108/146 (74%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 |||| ||||| |||||||| || || || |||||||||||||| || ||| | | ||| | Sbjct 6461 CGATGGTCATTCGACTGGGTATGGCGTGAGGATTGATGATGATATCTGGTGTGATTCCTT 6402 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTGTCCG 251961 | || ||||| ||||||| ||| | || || || |||| || || || || |||||| Sbjct 6401 CCGCCGTGAACGGCATAT-CTTCTTGTCTGTACATCATTCCCATGGTGCCTTTCTGTCCG 6343 Query 251962 TGACGAGAACTGAACTTATCACCAAT 251987 || | ||||||||| ||||| Sbjct 6342 TGCCTGCTGGCGAACTTATCGCCAAT 6317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471396395239232