Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2467 109 5e-19 seq259 98.7 9e-16 >seq2467 Length=23714 Score = 109 bits (120), Expect = 5e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||| | || |||||||| |||||| | ||||| ||| | | Sbjct 10981 ATGCAGATCTTCGTAAAGACGTTGACGGGTAAAACAATTACGTTAGAAGTGGAACCTTCT 10922 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| ||||| || || |||||||||||||| || |||||||||||| Sbjct 10921 GACACGATCGAAAACGTAAAGGCGAAAATTCAAGACAAAGAAGGCATCCCTCCCGATCAA 10862 Query 24824 CAACGTTTGATCTTTGCCGG 24843 || || ||||| ||||| || Sbjct 10861 CAGCGCTTGATTTTTGCAGG 10842 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | || || ||||||||||| | ||||| ||| | | Sbjct 10129 ATGCAGATATTCGTCAAGACATTGACTGGAAAAACTATTACTTTGGAAGTTGAACCATCG 10070 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || ||| ||||| || ||||||||||| |||||||| ||||| Sbjct 10069 GACACGATTGAAAATGTTAAAGCGAAGATTCAGGACAAAGAAGGGATACCTCCGGATCAG 10010 Query 24824 CAACGTTTGATCTTTGCCGG 24843 ||||| ||||| |||||||| Sbjct 10009 CAACGATTGATTTTTGCCGG 9990 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || | || || || || || || || || ||||| ||||| ||| | | Sbjct 9554 GATGCAAATTTTCGTGAAGACCCTCACGGGCAAGACGATAACGCTTGAAGTGGAACCATC 9495 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || |||||| || || |||||| ||||||||||||||||| ||||| ||||| Sbjct 9494 TGATACGATAGAAAACGTTAAGGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCA 9435 Query 24823 ACAACGTTTGATCTTTGCCGG 24843 ||| || || || || || || Sbjct 9434 ACAGCGCTTAATTTTCGCAGG 9414 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| ||||||| || ||||| || || ||||| | ||||| || | | Sbjct 10690 ATGCAGATCTTCGTTAAAACTCTGACCGGAAAGACGATTACTTTGGAAGTTGAGCCGTCT 10631 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || || |||||||| |||||||||||||| || || ||||| Sbjct 10630 GATACGATCGAAAACGTCAAGGCCAAGATCCAGGACAAAGAAGGAATCCCACCTGATCAG 10571 Query 24824 CAACGTTTGATCTTTGCCGGGAA 24846 || || || ||||| || || || Sbjct 10570 CAGCGCTTAATCTTCGCAGGCAA 10548 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | |||||| |||| || |||||||||||| | ||||| ||| | | Sbjct 10407 ATGCAGATTTTTGTCAAAACGTTAACGGGCAAAACTATTACGTTGGAAGTTGAACCGTCG 10348 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || || || || || ||||| || || ||||| ||||| Sbjct 10347 GACACGATTGAAAATGTTAAGGCTAAAATTCAGGATAAAGAGGGGATTCCTCCGGATCAG 10288 Query 24824 CAACGTTTGATCTTTGCCGG 24843 || || ||||| || || || Sbjct 10287 CAGCGATTGATTTTCGCAGG 10268 >seq259 Length=51451 Score = 98.7 bits (108), Expect = 9e-16 Identities = 108/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || ||||| || || ||||| || ||||| || |||| | Sbjct 12398 ATGCAGATATTCGTCAAAACCCTGACCGGCAAGACGATTACCCTTGAAGTTGA-GCCATC 12456 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | |||| || ||| ||||| ||||||||||||||||| ||||||||||| Sbjct 12457 TGATACCATTGAAAACGTGAAAGCCAAGATTCAAGACAAAGAAGGAATCCCTCCCGATCA 12516 Query 24823 ACAACGTTTGATCTTTGCCGG 24843 || || || || ||||| || Sbjct 12517 GCAGCGCTTAATATTTGCAGG 12537 Score = 86.0 bits (94), Expect = 6e-12 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || || || || ||||| || | || ||||| |||| | Sbjct 11820 ATGCAGATTTTTGTCAAAACCCTTACAGGAAAGACTATAACTTTGGAGGTAGA-GCCATC 11878 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | |||| || ||| || || ||||||||||| ||||| ||||| ||||| Sbjct 11879 AGATACGATTGAAAATGTCAAAGCCAAAATTCAAGACAAAGAGGGAATTCCTCCAGATCA 11938 Query 24823 ACAACGTTTGATCTTTGCCGG 24843 ||||| | |||||||| || Sbjct 11939 GCAACGACTAATCTTTGCTGG 11959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449771988590080