Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12]
22,336 sequences; 218,332,512 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq2467 109 5e-19
seq259 98.7 9e-16
>seq2467
Length=23714
Score = 109 bits (120), Expect = 5e-19
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||| | || |||||||| |||||| | ||||| ||| | |
Sbjct 10981 ATGCAGATCTTCGTAAAGACGTTGACGGGTAAAACAATTACGTTAGAAGTGGAACCTTCT 10922
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| ||||| || || |||||||||||||| || ||||||||||||
Sbjct 10921 GACACGATCGAAAACGTAAAGGCGAAAATTCAAGACAAAGAAGGCATCCCTCCCGATCAA 10862
Query 24824 CAACGTTTGATCTTTGCCGG 24843
|| || ||||| ||||| ||
Sbjct 10861 CAGCGCTTGATTTTTGCAGG 10842
Score = 100 bits (110), Expect = 3e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || | || || ||||||||||| | ||||| ||| | |
Sbjct 10129 ATGCAGATATTCGTCAAGACATTGACTGGAAAAACTATTACTTTGGAAGTTGAACCATCG 10070
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || ||| ||||| || ||||||||||| |||||||| |||||
Sbjct 10069 GACACGATTGAAAATGTTAAAGCGAAGATTCAGGACAAAGAAGGGATACCTCCGGATCAG 10010
Query 24824 CAACGTTTGATCTTTGCCGG 24843
||||| ||||| ||||||||
Sbjct 10009 CAACGATTGATTTTTGCCGG 9990
Score = 87.8 bits (96), Expect = 2e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || || | || || || || || || || || ||||| ||||| ||| | |
Sbjct 9554 GATGCAAATTTTCGTGAAGACCCTCACGGGCAAGACGATAACGCTTGAAGTGGAACCATC 9495
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || |||||| || || |||||| ||||||||||||||||| ||||| |||||
Sbjct 9494 TGATACGATAGAAAACGTTAAGGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCA 9435
Query 24823 ACAACGTTTGATCTTTGCCGG 24843
||| || || || || || ||
Sbjct 9434 ACAGCGCTTAATTTTCGCAGG 9414
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| ||||||| || ||||| || || ||||| | ||||| || | |
Sbjct 10690 ATGCAGATCTTCGTTAAAACTCTGACCGGAAAGACGATTACTTTGGAAGTTGAGCCGTCT 10631
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | |||| || || |||||||| |||||||||||||| || || |||||
Sbjct 10630 GATACGATCGAAAACGTCAAGGCCAAGATCCAGGACAAAGAAGGAATCCCACCTGATCAG 10571
Query 24824 CAACGTTTGATCTTTGCCGGGAA 24846
|| || || ||||| || || ||
Sbjct 10570 CAGCGCTTAATCTTCGCAGGCAA 10548
Score = 86.0 bits (94), Expect = 6e-12
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | |||||| |||| || |||||||||||| | ||||| ||| | |
Sbjct 10407 ATGCAGATTTTTGTCAAAACGTTAACGGGCAAAACTATTACGTTGGAAGTTGAACCGTCG 10348
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || || || || || || ||||| || || ||||| |||||
Sbjct 10347 GACACGATTGAAAATGTTAAGGCTAAAATTCAGGATAAAGAGGGGATTCCTCCGGATCAG 10288
Query 24824 CAACGTTTGATCTTTGCCGG 24843
|| || ||||| || || ||
Sbjct 10287 CAGCGATTGATTTTCGCAGG 10268
>seq259
Length=51451
Score = 98.7 bits (108), Expect = 9e-16
Identities = 108/141 (77%), Gaps = 2/141 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| || ||||| || || ||||| || ||||| || |||| |
Sbjct 12398 ATGCAGATATTCGTCAAAACCCTGACCGGCAAGACGATTACCCTTGAAGTTGA-GCCATC 12456
Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | |||| || ||| ||||| ||||||||||||||||| |||||||||||
Sbjct 12457 TGATACCATTGAAAACGTGAAAGCCAAGATTCAAGACAAAGAAGGAATCCCTCCCGATCA 12516
Query 24823 ACAACGTTTGATCTTTGCCGG 24843
|| || || || ||||| ||
Sbjct 12517 GCAGCGCTTAATATTTGCAGG 12537
Score = 86.0 bits (94), Expect = 6e-12
Identities = 105/141 (74%), Gaps = 2/141 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | ||||| || || || || ||||| || | || ||||| |||| |
Sbjct 11820 ATGCAGATTTTTGTCAAAACCCTTACAGGAAAGACTATAACTTTGGAGGTAGA-GCCATC 11878
Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | |||| || ||| || || ||||||||||| ||||| ||||| |||||
Sbjct 11879 AGATACGATTGAAAATGTCAAAGCCAAAATTCAAGACAAAGAGGGAATTCCTCCAGATCA 11938
Query 24823 ACAACGTTTGATCTTTGCCGG 24843
||||| | |||||||| ||
Sbjct 11939 GCAACGACTAATCTTTGCTGG 11959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449771988590080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |