Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq2467 87.8 3e-12 seq259 84.2 3e-11 >seq2467 Length=23714 Score = 87.8 bits (96), Expect = 3e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| |||| || || || || ||||||||||| | || || |||| | | Sbjct 10980 TGCAGATCTTCGTAAAGACGTTGACGGGTAAAACAATTACGTTAGAAGTGGAACCTTCTG 10921 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || |||| ||||| ||||| ||| ||||||||||| || |||||||||| Sbjct 10920 ACACGATCGAAAACGTAAAGGCGAAAATTCAAGACAAAGAAGGCATCCCTCCCGATCAAC 10861 Query 146152 AAAGACTCATTTTTGCAGGTA 146172 | | | ||||||||||||| Sbjct 10860 AGCGCTTGATTTTTGCAGGTA 10840 >seq259 Length=51451 Score = 84.2 bits (92), Expect = 3e-11 Identities = 106/143 (74%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| || | || || | ||||| || |||||||| | || || ||| ||| Sbjct 12677 TGCAAATTTTTGTCAAGACGCTTACAGGCAAGACAATTACCTTGGAAGTTGAAGCATCG- 12735 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| ||||||| || || || || ||||||||| ||||| || |||||| Sbjct 12736 GACACGATTGAAAATGTTAAGGCGAAGATTCAGGATAAAGAAGGGATTCCTCCGGATCAA 12795 Query 146151 CAAAGACTCATTTTTGCAGGTAA 146173 || ||||| |||||||||||||| Sbjct 12796 CAGAGACTTATTTTTGCAGGTAA 12818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785946902341120