Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2467 118 8e-22 seq259 116 3e-21 >seq2467 Length=23714 Score = 118 bits (130), Expect = 8e-22 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || |||||| | ||||||||||||||||| || ||||| ||||| |||||||||| ||| Sbjct 9705 TTACCAGCAAAAATCAATCTTTGCTGATCAGGGGGAATGCCCTCCTTGTCTTGTATTTTA 9764 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 ||| ||| |||| | ||||| || | || || || || || |||||||| || ||| Sbjct 9765 GCTTTAACATTTTCAATTGTGTCTGACGGCTCGACCTCCAGCGTGATAGTTTTTCCCGTT 9824 Query 29764 AAGGTTTTAACAAATATCTGCAT 29786 || ||||| ||||| || ||||| Sbjct 9825 AAAGTTTTGACAAAAATTTGCAT 9847 Score = 111 bits (122), Expect = 1e-19 Identities = 106/133 (80%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 29656 ATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGT 29714 ||||||| ||||||||||| ||||| |||||||| || || |||||| | || ||| | Sbjct 10277 ATCAATCGCTGCTGATCCGGAGGAATCCCCTCTTTATCCTG-AATTTTAGCCTTAACATT 10335 Query 29715 TTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAAC 29774 ||| | ||||| || |||| ||||| | || ||||||||||| ||||| ||||| || Sbjct 10336 TTCAATCGTGTCCGACGGTTCAACTTCCAACGTAATAGTTTTGCCCGTTAACGTTTTGAC 10395 Query 29775 AAATATCTGCATT 29787 ||| ||||||||| Sbjct 10396 AAAAATCTGCATT 10408 Score = 107 bits (118), Expect = 1e-18 Identities = 110/141 (78%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 29647 CCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG- 29705 || ||| | ||||||| |||||||||||| || || || |||||||| || ||| || | Sbjct 9990 CCGGCAAAAATCAATCGTTGCTGATCCGGAGGTATCCCTTCTTTGTCCTG-AATCTTCGC 10048 Query 29706 TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAA 29765 ||| ||| |||| | ||||| || |||| ||||| | ||| |||||||| ||||| || Sbjct 10049 TTTAACATTTTCAATCGTGTCCGATGGTTCAACTTCCAAAGTAATAGTTTTTCCAGTCAA 10108 Query 29766 GGTTTTAACAAATATCTGCAT 29786 || || || ||||||||||| Sbjct 10109 TGTCTTGACGAATATCTGCAT 10129 Score = 86.0 bits (94), Expect = 5e-12 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 29647 CCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG- 29705 || ||| | ||||| | || ||||| || || || || ||||||||||| |||||| | Sbjct 10842 CCTGCAAAAATCAAGCGCTGTTGATCGGGAGGGATGCCTTCTTTGTCTTG-AATTTTCGC 10900 Query 29706 TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAA 29765 || || |||| | ||||||||| |||| ||||| | || || ||||| || || || Sbjct 10901 CTTTACGTTTTCGATCGTGTCAGAAGGTTCCACTTCTAACGTAATTGTTTTACCCGTCAA 10960 Query 29766 GGTTTTAACAAATATCTGCATTTT 29789 || || || || ||||||||||| Sbjct 10961 CGTCTTTACGAAGATCTGCATTTT 10984 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 29665 TGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGT 29723 || ||||| || ||||| || ||||||||||| ||| |||| || || |||||| || Sbjct 9432 TGTTGATCAGGAGGAATTCCTTCTTTGTCTTG-AATCTTTGCCTTAACGTTTTCTATCGT 9490 Query 29724 GTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTG 29783 ||||| |||| |||||||| ||||| || ||||| || | ||| || || || || || Sbjct 9491 ATCAGATGGTTCCACTTCAAGCGTTATCGTCTTGCCCGTGAGGGTCTTCACGAAAATTTG 9550 Query 29784 CAT 29786 ||| Sbjct 9551 CAT 9553 >seq259 Length=51451 Score = 116 bits (128), Expect = 3e-21 Identities = 118/151 (78%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 || |||| | || ||| ||||||| | |||||||||||||||||||||||||||||||| Sbjct 9777 GAATTGTATACCTGCAAATATCAAGCGCTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 9718 Query 29697 TAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTT 29755 |||||| | || || | || | || |||||| |||||||||| | || || |||| Sbjct 9717 -AATTTTCGCCTTCACGTTCTCAATTGTATCAGAAGGTTCTACTTCCAATGTGATCGTTT 9659 Query 29756 TGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||| || ||||| || || || ||||| Sbjct 9658 TTCCAGTCAACGTTTTGACGAAGATTTGCAT 9628 Score = 113 bits (124), Expect = 3e-20 Identities = 111/141 (79%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 29647 CCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG- 29705 |||||| | || | || ||||||||| || ||||| |||||||||||||| |||||| | Sbjct 11959 CCAGCAAAGATTAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTG-AATTTTGGC 11901 Query 29706 TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAA 29765 ||||||| |||| | || || || | ||||| || | ||||||||| || || || | Sbjct 11900 TTTGACATTTTCAATCGTATCTGATGGCTCTACCTCCAAAGTTATAGTCTTTCCTGTAAG 11841 Query 29766 GGTTTTAACAAATATCTGCAT 29786 |||||| ||||| |||||||| Sbjct 11840 GGTTTTGACAAAAATCTGCAT 11820 Score = 96.9 bits (106), Expect = 3e-15 Identities = 108/142 (76%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 29647 CCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG- 29705 |||||| |||| | || || ||||| || ||||| ||||||||||| || ||| |||| Sbjct 13096 CCAGCAAATATTAGTCGCTGTTGATCAGGTGGAATGCCCTCTTTGTCCTG-AATCTTTGC 13038 Query 29706 TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAA 29765 || || |||| | |||||||| | || || || | |||||||| |||||||| | Sbjct 13037 CTTCACGTTTTCGATTGTGTCAGACGGCTCGACCTCCAATGTTATAGTCTTGCCAGTAAG 12978 Query 29766 GGTTTTAACAAATATCTGCATT 29787 |||||||| ||||| |||||| Sbjct 12977 AGTTTTAACGAATATTTGCATT 12956 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 29647 CCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG- 29705 || ||| |||| || | |||||||| || || || || ||||||||||| ||| || | Sbjct 12537 CCTGCAAATATTAAGCGCTGCTGATCGGGAGGGATTCCTTCTTTGTCTTG-AATCTTGGC 12479 Query 29706 TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAA 29765 ||| || |||| | || ||||| | || |||||||| || || || ||||| || | Sbjct 12478 TTTCACGTTTTCAATGGTATCAGATGGCTCAACTTCAAGGGTAATCGTCTTGCCGGTCAG 12419 Query 29766 GGTTTTAACAAATATCTGCAT 29786 |||||| || ||||||||||| Sbjct 12418 GGTTTTGACGAATATCTGCAT 12398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385114335629376