Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq65 136 3e-26 seq7623 113 3e-19 >seq65 Length=71031 Score = 136 bits (150), Expect = 3e-26 Identities = 317/470 (67%), Gaps = 11/470 (2%) Strand=Plus/Minus Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 282427 ||||| || ||||| | ||||||| | || || || ||| | || || || || || || Sbjct 30192 GGTTCGTTTATAATACGCAAAACAGTGAGTCCTGCTATTGTACCAGCGTCCTTCGTCGCC 30133 Query 282428 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTT 282487 ||||| || | |||||| || |||||||||||||||||||| |||| || || | | Sbjct 30132 TGTCTCTGCGCATCGTTGAAGTATGCAGGAACAGTAATAACAGCATGCGTAACGTTCTGG 30073 Query 282488 CCAATATAAGCGCTT--GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 282545 |||| ||| | || ||||||| |||||||| ||| | ||| | |||||| |||| Sbjct 30072 CCAAGATA--CTGTTCGGCTGTTTCCTTCATTTTCTCTAATACCATGGCTGAAATCTGTT 30015 Query 282546 CTGGAG-AATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCA 282604 |||| | || | | ||| | ||||| || |||| || | | || || Sbjct 30014 CTGGCGCAAAAGTTTTTGAAGCGCCTTTGA-CCGAAACTTTAATTTCAACTGATTTTCCC 29956 Query 282605 ACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAA 282664 ||| |||| | || ||||||| ||| | || ||| | || ||| | | Sbjct 29955 TTTTTATCAACTGTGAAAGGCCAATGTTTTCTGTCATTTTGCAGTTCTTTGTCTTCCCAG 29896 Query 282665 TCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTG-CAGCTTG 282723 || ||||| | || |||| |||| |||| || || |||||||| || ||| ||| Sbjct 29895 CTTCGACCAAGAATTCTTTTTACATCGAAAACTGTGTTTTCTGGATTAATTGTCAG-TTG 29837 Query 282724 ATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTC---TGTAAATGAAACATATGATGG 282780 || |||||| |||||||| | || | |||| || || |||| ||| ||||| || Sbjct 29836 ATTTTTGGCAGCATCTCCGACCAAACGTTCGCCTTCAGGAGTGAATGCAACGTATGAAGG 29777 Query 282781 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTT 282830 ||| | || || || || || || || || || || ||| | ||||||| Sbjct 29776 AGTGATCCGGTTTCCCTGGTCGTTAGCTATGATCTCTACTCTGCCATTTT 29727 >seq7623 Length=9951 Score = 113 bits (124), Expect = 3e-19 Identities = 245/364 (67%), Gaps = 2/364 (1%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 |||||||| | |||||| || | ||||||||||| || || ||||| || | | ||| Sbjct 2403 TTTTTATCCAAACCATATGCGATGGCAGCAGCAGTAGGCTCGTTAATGATACGAAGCACA 2462 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || | || | ||| | || |||||||| || || |||| || |||||||| || ||| Sbjct 2463 TTCAACCCCGAAATCGTACCCGCATCTTTCGTTGCCTGTCGCTGCGAATCGTTGAAGTAT 2522 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCT-TTTCCAATATAAGCGCTTGCTGTTTG 282510 || || || ||||| || |||||| |||| | ||||||| ||||| || || | Sbjct 2523 GCCGGCACCGTAATGACCGCATCT-TTACAGGTCTTTCCAAGGTAAGCTTCCGCAGTCTC 2581 Query 282511 TTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATT 282570 |||||||| | || | ||||| |||| ||| || | | | || | ||| Sbjct 2582 CTTCATTTTTGTCAACACCATTGCGCTGATTTCTTCAGGTGTAAAAGTTTTCGTTTCGCC 2641 Query 282571 TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATA 282630 | ||| || | | | |||||| || |||| ||||| || || ||||| | Sbjct 2642 CTTGTATTCAACCTGCACCTTGGGTTTACCGCCGTCATTTATAACCTTGAACGGCCAGTG 2701 Query 282631 TTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATC 282690 |||||| || ||||| ||| || | |||| || || ||||| || |||||||| Sbjct 2702 TTTCATGTCAGATTGTACAGGGGCATCCTCAAAACGCCTGCCGATTAAGCGCTTTGCATC 2761 Query 282691 AAAA 282694 ||| Sbjct 2762 TAAA 2765 Score = 98.7 bits (108), Expect = 7e-15 Identities = 184/264 (70%), Gaps = 6/264 (2%) Strand=Plus/Plus Query 281775 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 281834 |||| |||||||| || |||||||| || || | | | || || | ||| ||||||| Sbjct 1686 CAGCGCCATATGCCACCGCTTCATCCGGGTTTATGCTCTTGTTCAGCTCTTTTCCATTGA 1745 Query 281835 AAAAATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACA 281893 | || | || | || || | |||||||||||||||| ||||| ||||| | || Sbjct 1746 AGAAGTCCTGCAGCAACTTCTGG-ACCTTAGGAATACGAGTAGATCCGCCAACAAGCACT 1804 Query 281894 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 281953 | ||||| | ||| ||||| || ||||| | ||| | | || || || |||||| Sbjct 1805 ACGTCATGGATCTGAGATTTGTCAAGTTTGGCATCTCTCAGAGACTTCTCCACAGGTTCA 1864 Query 281954 AGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACA 282013 || | |||||||| | | ||||||||| || ||||||| |||| ||| | Sbjct 1865 CAGGTAGAATTGAACAAGTCAGCATTAAGTTCTTCAAACCTAGCTCTCGTAATAGT--CG 1922 Query 282014 T-TATAA-TCAATTCCTTCGAACA 282035 | || || || ||||||||||||| Sbjct 1923 TGTAGAAGTCTATTCCTTCGAACA 1946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739533796791936