Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq2467 98.7 1e-15 seq259 89.7 5e-13 >seq2467 Length=23714 Score = 98.7 bits (108), Expect = 1e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 137270 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTT 137329 |||| ||| | |||| ||||||||||| |||||||| ||||||||||| ||| || Sbjct 9988 TACCGGCAAAAATCAATCGTTGCTGATCCGGAGGTATCCCTTCTTTGTCCTGAATCTTCG 10047 Query 137330 GTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCA 137389 ||| | | ||| | |||||| | ||||| ||||| | ||| | || || || |||| Sbjct 10048 CTTTAACATTTTCAATCGTGTCCGATGGTTCAACTTCCAAAGTAATAGTTTTTCCAGTCA 10107 Query 137390 ATGTTTTTACGAATATTTGCAT 137411 |||| || |||||||| ||||| Sbjct 10108 ATGTCTTGACGAATATCTGCAT 10129 Score = 89.7 bits (98), Expect = 5e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 137270 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTT 137329 |||| ||| | |||| || || ||||||||||| |||||||||||||| |||||| Sbjct 10840 TACCTGCAAAAATCAAGCGCTGTTGATCGGGAGGGATGCCTTCTTTGTCTTGAATTTTCG 10899 Query 137330 GTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCA 137389 |||| | ||| | |||||| | ||||| ||||| | || | || || || |||| Sbjct 10900 CCTTTACGTTTTCGATCGTGTCAGAAGGTTCCACTTCTAACGTAATTGTTTTACCCGTCA 10959 Query 137390 ATGTTTTTACGAATATTTGCAT 137411 | || |||||||| || ||||| Sbjct 10960 ACGTCTTTACGAAGATCTGCAT 10981 >seq259 Length=51451 Score = 89.7 bits (98), Expect = 5e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 137270 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTT 137329 |||| ||| | || | || |||||||||||||| || ||||||||||| ||| || Sbjct 12539 TACCTGCAAATATTAAGCGCTGCTGATCGGGAGGGATTCCTTCTTTGTCTTGAATCTTGG 12480 Query 137330 GTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCA 137389 ||| | | ||| | || || | || || ||||||| || | |||||||||||||| Sbjct 12479 CTTTCACGTTTTCAATGGTATCAGATGGCTCAACTTCAAGGGTAATCGTCTTGCCGGTCA 12420 Query 137390 ATGTTTTTACGAATATTTGCAT 137411 ||||| |||||||| ||||| Sbjct 12419 GGGTTTTGACGAATATCTGCAT 12398 Score = 86.0 bits (94), Expect = 6e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 137270 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTT 137329 |||||||| |||| || ||||||||||| ||||| || || |||||||| |||||| Sbjct 11961 TACCAGCAAAGATTAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAATTTTGG 11902 Query 137330 GTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCA 137389 ||| | | ||| | ||| |||| || ||||| || | ||| | ||||| || || | Sbjct 11901 CTTTGACATTTTCAATCGTATCTGATGGCTCTACCTCCAAAGTTATAGTCTTTCCTGTAA 11842 Query 137390 ATGTTTTTACGAATATTTGCAT 137411 ||||| || || || ||||| Sbjct 11841 GGGTTTTGACAAAAATCTGCAT 11820 Score = 86.0 bits (94), Expect = 6e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 137270 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTT 137329 |||||||| | || || ||||||||||| || || || |||||||| || ||| ||| Sbjct 12246 TACCAGCAAAAATAAGTCGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATCTTTG 12187 Query 137330 GTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCA 137389 ||| | | ||| | || |||| || || ||||| | ||| | ||| ||||| || | Sbjct 12186 CTTTAACATTTTCAATGGTATCTGAAGGCTCGACTTCTAAAGTGATCGTTTTGCCTGTGA 12127 Query 137390 ATGTTTTTACGAATATTTGCAT 137411 || |||||||| |||||||| Sbjct 12126 GGGTCTTTACGAAAATTTGCAT 12105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488407598515200