Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12]
22,336 sequences; 218,332,512 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq259 149 1e-30
seq2467 131 3e-25
seq1945 86.0 1e-11
>seq259
Length=51451
Score = 149 bits (164), Expect = 1e-30
Identities = 117/140 (84%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730
|||||||||||||||| ||| ||||||||||| ||||| || || |||||||| || |||
Sbjct 11959 CCAGCAAAGATTAGTCGTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAATTTTGGCT 11900
Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790
|| ||||||||||||||||| || ||||| ||||||||||| ||||| ||||| |
Sbjct 11899 TTGACATTTTCAATCGTATCTGATGGCTCTACCTCCAAAGTTATAGTCTTTCCTGTAAGG 11840
Query 82791 GTCTTTACAAATATCTGCAT 82810
|| || ||||| ||||||||
Sbjct 11839 GTTTTGACAAAAATCTGCAT 11820
Score = 140 bits (154), Expect = 6e-28
Identities = 115/140 (82%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730
|||||||| || |||| ||| ||||| || || |||||||| ||||| ||||||||||||
Sbjct 12244 CCAGCAAAAATAAGTCGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATCTTTGCT 12185
Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790
|| ||||||||||| ||||| ||| || ||||| ||||| ||||| |||||||| |
Sbjct 12184 TTAACATTTTCAATGGTATCTGAAGGCTCGACTTCTAAAGTGATCGTTTTGCCTGTGAGG 12125
Query 82791 GTCTTTACAAATATCTGCAT 82810
|||||||| || || |||||
Sbjct 12124 GTCTTTACGAAAATTTGCAT 12105
Score = 134 bits (148), Expect = 3e-26
Identities = 122/153 (80%), Gaps = 3/153 (2%)
Strand=Plus/Minus
Query 82662 AGTTGTT---TTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
||||||| | || ||||| || ||||| |||||||| ||||| || ||||| |||||
Sbjct 12827 AGTTGTTCCTTACCTGCAAAAATAAGTCTCTGTTGATCCGGAGGAATCCCTTCTTTATCC 12768
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778
|||||||| || || |||||||||||||| || | ||| |||||||| || || |||
Sbjct 12767 TGAATCTTCGCCTTAACATTTTCAATCGTGTCCGATGCTTCAACTTCCAAGGTAATTGTC 12708
Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|||||||| | |||||| ||||| || ||||||
Sbjct 12707 TTGCCTGTAAGCGTCTTGACAAAAATTTGCATT 12675
Score = 132 bits (146), Expect = 9e-26
Identities = 114/141 (81%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730
|| |||||||||| ||| || ||||| || || |||||||| ||||| ||||| ||||||
Sbjct 11392 CCTGCAAAGATTAATCTCTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATTTTTGCT 11333
Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790
||||| ||||| ||||||||| || || || ||||||||||| || || || |||||
Sbjct 11332 TTTACGTTTTCGATCGTATCAGATGGCTCGACCTCCAAAGTTATTGTTTTACCCGTCAAG 11273
Query 82791 GTCTTTACAAATATCTGCATT 82811
|| || || || |||||||||
Sbjct 11272 GTTTTGACGAAAATCTGCATT 11252
Score = 122 bits (134), Expect = 2e-22
Identities = 111/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730
|| ||||| || | | || || ||||| || || |||||||||||||||||||| ||
Sbjct 11669 CCTGCAAAAATCAAGCGCTGCTGGTCTGGTGGAATCCCTTCCTTATCTTGAATCTTAGCC 11610
Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790
|| ||||| || || |||||| |||||| || |||||||| ||||| ||||| || | |
Sbjct 11609 TTAACATTCTCTATGGTATCAGAAGGTTCAACCTCCAAAGTAATCGTTTTGCCGGTAAGC 11550
Query 82791 GTCTTTACAAATATCTGCAT 82810
|||||||| || ||||||||
Sbjct 11549 GTCTTTACGAAAATCTGCAT 11530
Score = 118 bits (130), Expect = 2e-21
Identities = 110/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730
|| ||||| |||| | || ||||| ||||| |||||||| || ||||||||||| |||
Sbjct 12537 CCTGCAAATATTAAGCGCTGCTGATCGGGAGGGATTCCTTCTTTGTCTTGAATCTTGGCT 12478
Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790
|| || |||||||| |||||| || || ||||| | || ||||||||||| ||||
Sbjct 12477 TTCACGTTTTCAATGGTATCAGATGGCTCAACTTCAAGGGTAATCGTCTTGCCGGTCAGG 12418
Query 82791 GTCTTTACAAATATCTGCAT 82810
|| || || |||||||||||
Sbjct 12417 GTTTTGACGAATATCTGCAT 12398
Score = 107 bits (118), Expect = 4e-18
Identities = 115/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 82664 TTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAAT 82723
|||| | || ||||| || | | || ||||| || || || || || || ||||||||
Sbjct 9774 TTGTATACCTGCAAATATCAAGCGCTGCTGATCCGGCGGAATACCCTCTTTGTCTTGAAT 9715
Query 82724 CTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCC 82783
|| || || || || ||||| |||||| ||||||||||||||| || ||||| || ||
Sbjct 9714 TTTCGCCTTCACGTTCTCAATTGTATCAGAAGGTTCTACTTCCAATGTGATCGTTTTTCC 9655
Query 82784 TGTCAACGTCTTTACAAATATCTGCATTATTA 82815
|||||||| || || || || ||||| ||||
Sbjct 9654 AGTCAACGTTTTGACGAAGATTTGCATGATTA 9623
Score = 105 bits (116), Expect = 1e-17
Identities = 108/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730
|||||||| ||||||| |||||||| || || || || || || || |||||||||||
Sbjct 13096 CCAGCAAATATTAGTCGCTGTTGATCAGGTGGAATGCCCTCTTTGTCCTGAATCTTTGCC 13037
Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790
|| || ||||| || || ||| || || || ||||| ||||| |||||||| || |
Sbjct 13036 TTCACGTTTTCGATTGTGTCAGACGGCTCGACCTCCAATGTTATAGTCTTGCCAGTAAGA 12977
Query 82791 GTCTTTACAAATATCTGCATT 82811
|| || || ||||| ||||||
Sbjct 12976 GTTTTAACGAATATTTGCATT 12956
>seq2467
Length=23714
Score = 131 bits (144), Expect = 3e-25
Identities = 113/140 (81%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730
|| ||||| || | || ||| ||||| |||||||| ||||| || || |||||||| |||
Sbjct 9990 CCGGCAAAAATCAATCGTTGCTGATCCGGAGGTATCCCTTCTTTGTCCTGAATCTTCGCT 10049
Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790
|| |||||||||||||| || ||||| ||||||||||| || || || || |||||
Sbjct 10050 TTAACATTTTCAATCGTGTCCGATGGTTCAACTTCCAAAGTAATAGTTTTTCCAGTCAAT 10109
Query 82791 GTCTTTACAAATATCTGCAT 82810
||||| || |||||||||||
Sbjct 10110 GTCTTGACGAATATCTGCAT 10129
Score = 120 bits (132), Expect = 6e-22
Identities = 113/144 (78%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730
|| ||||| || | | |||||||| ||||| || ||||| || |||||||| || ||
Sbjct 10842 CCTGCAAAAATCAAGCGCTGTTGATCGGGAGGGATGCCTTCTTTGTCTTGAATTTTCGCC 10901
Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790
||||| ||||| ||||| ||| |||||| ||||| || || || || || || ||||||
Sbjct 10902 TTTACGTTTTCGATCGTGTCAGAAGGTTCCACTTCTAACGTAATTGTTTTACCCGTCAAC 10961
Query 82791 GTCTTTACAAATATCTGCATTATT 82814
|||||||| || ||||||||| ||
Sbjct 10962 GTCTTTACGAAGATCTGCATTTTT 10985
Score = 118 bits (130), Expect = 2e-21
Identities = 110/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730
|| || || |||| | |||||||| ||||| |||||||| || ||||||||||||||
Sbjct 9414 CCTGCGAAAATTAAGCGCTGTTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCC 9473
Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790
|| || ||||| ||||||||| ||||| ||||| | |||||||||||||| || |
Sbjct 9474 TTAACGTTTTCTATCGTATCAGATGGTTCCACTTCAAGCGTTATCGTCTTGCCCGTGAGG 9533
Query 82791 GTCTTTACAAATATCTGCAT 82810
||||| || || || |||||
Sbjct 9534 GTCTTCACGAAAATTTGCAT 9553
Score = 105 bits (116), Expect = 1e-17
Identities = 108/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730
|| || || || | || || ||||| ||||| || || || ||||| ||||| || ||
Sbjct 10268 CCTGCGAAAATCAATCGCTGCTGATCCGGAGGAATCCCCTCTTTATCCTGAATTTTAGCC 10327
Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790
|| |||||||||||||| || ||||| |||||||| || || || ||||| || |||
Sbjct 10328 TTAACATTTTCAATCGTGTCCGACGGTTCAACTTCCAACGTAATAGTTTTGCCCGTTAAC 10387
Query 82791 GTCTTTACAAATATCTGCATT 82811
|| || ||||| |||||||||
Sbjct 10388 GTTTTGACAAAAATCTGCATT 10408
Score = 105 bits (116), Expect = 1e-17
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| || || ||||||| | || ||||| || || |||||||| || || || |||||
Sbjct 10548 TTGCCTGCGAAGATTAAGCGCTGCTGATCAGGTGGGATTCCTTCTTTGTCCTGGATCTTG 10607
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| || || ||||| ||||||||| || || ||||||||||| |||||||| || |||
Sbjct 10608 GCCTTGACGTTTTCGATCGTATCAGACGGCTCAACTTCCAAAGTAATCGTCTTTCCGGTC 10667
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| || || || || ||||||||
Sbjct 10668 AGAGTTTTAACGAAGATCTGCAT 10690
Score = 95.1 bits (104), Expect = 2e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|||| || || |||||||| || | |||||| ||||| || || || || ||||| |||
Sbjct 9696 TCTATTTAATTACCAGCAAAAATCAATCTTTGCTGATCAGGGGGAATGCCCTCCTTGTCT 9755
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778
|| || || ||||| ||||||||||| || || || || || |||| || || ||
Sbjct 9756 TGTATTTTAGCTTTAACATTTTCAATTGTGTCTGACGGCTCGACCTCCAGCGTGATAGTT 9815
Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || || || || || ||||| || |||||
Sbjct 9816 TTTCCCGTTAAAGTTTTGACAAAAATTTGCAT 9847
>seq1945
Length=26447
Score = 86.0 bits (94), Expect = 1e-11
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| ||||||||||| || | || |||||||| |||||||| ||| |||||
Sbjct 13464 ATACCTTCTTTATCTTGAATTTTGGACTTCACATTTTCGATCGTATCTGAAGGCTCTACC 13523
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || || || || ||||| || | ||| || || |||||||||||
Sbjct 13524 TCTAACGTAATAGTTTTGCCGGTTAGCGTTTTCACGAATATCTGCAT 13570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981546220691904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |