Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12]
22,336 sequences; 218,332,512 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq3185 100 4e-15
seq3203 91.5 2e-12
>seq3185
Length=20614
Score = 100 bits (110), Expect = 4e-15
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 724961 CAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCAC 725020
|| |||| | ||||| ||||||||| || || |||||| || | || || |||| ||
Sbjct 340 CAGCAAGGCGATGTCTATCATGAACAGCTTCGTGAACGACGTGTTTGAGCGAATCGCCAG 399
Query 725021 CGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCA 725080
|| || || |||| | | |||||| || | ||| ||| ||| ||||| |||||
Sbjct 400 TGAAGCATCACGGTTGGCTCAGTACAACAAACGTAGCACCATCAGCAGTCGCGAAATCCA 459
Query 725081 GACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
||| ||||||||||| | ||| |||||||||| | | || ||||| |||||||||
Sbjct 460 GACGGCCGTGCGCCTTTTGCTGCCCGGCGAACTGTCGAAACATGCCGTAAGCGAGGGCAC 519
>seq3203
Length=20522
Score = 91.5 bits (100), Expect = 2e-12
Identities = 159/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|| ||||| || || |||||||| || ||| |||| |||| | | |||| |
Sbjct 6006 ATTTACAAAGTCCTGAAGCAGGTTCATCCCGACACCGG-----CATCAGC-AGCAAGGCG 5953
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||||||||||||| ||||| ||||| | | || ||||| | || || || |
Sbjct 5952 ATGTCGATCATGAACAGCTTTGTGAACGATGTATTTGAACGCATTGCCAGTGAAGCTTCT 5893
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| || || | | ||||||| | | ||||||| ||| || ||||| |||||||| ||
Sbjct 5892 CGTCTTGCCCAATACAACAAGAGAAGCACGATCAGCAGCCGAGAGATTCAGACCGCTGTT 5833
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| || | ||| || || ||| | | |||||| ||| ||||||||
Sbjct 5832 CGACTTCTGTTGCCGGGTGAGCTGTCGAAGCACGCTGTCAGTGAGGGCAC 5783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7175656851746432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |