Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3185 100 4e-15 seq3203 91.5 2e-12 >seq3185 Length=20614 Score = 100 bits (110), Expect = 4e-15 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 724961 CAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCAC 725020 || |||| | ||||| ||||||||| || || |||||| || | || || |||| || Sbjct 340 CAGCAAGGCGATGTCTATCATGAACAGCTTCGTGAACGACGTGTTTGAGCGAATCGCCAG 399 Query 725021 CGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCA 725080 || || || |||| | | |||||| || | ||| ||| ||| ||||| ||||| Sbjct 400 TGAAGCATCACGGTTGGCTCAGTACAACAAACGTAGCACCATCAGCAGTCGCGAAATCCA 459 Query 725081 GACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||| ||||||||||| | ||| |||||||||| | | || ||||| ||||||||| Sbjct 460 GACGGCCGTGCGCCTTTTGCTGCCCGGCGAACTGTCGAAACATGCCGTAAGCGAGGGCAC 519 >seq3203 Length=20522 Score = 91.5 bits (100), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 || ||||| || || |||||||| || ||| |||| |||| | | |||| | Sbjct 6006 ATTTACAAAGTCCTGAAGCAGGTTCATCCCGACACCGG-----CATCAGC-AGCAAGGCG 5953 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||||||||||||| ||||| ||||| | | || ||||| | || || || | Sbjct 5952 ATGTCGATCATGAACAGCTTTGTGAACGATGTATTTGAACGCATTGCCAGTGAAGCTTCT 5893 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || || | | ||||||| | | ||||||| ||| || ||||| |||||||| || Sbjct 5892 CGTCTTGCCCAATACAACAAGAGAAGCACGATCAGCAGCCGAGAGATTCAGACCGCTGTT 5833 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || || | ||| || || ||| | | |||||| ||| |||||||| Sbjct 5832 CGACTTCTGTTGCCGGGTGAGCTGTCGAAGCACGCTGTCAGTGAGGGCAC 5783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7175656851746432