Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2467 114 1e-20 seq259 96.9 4e-15 seq4487 87.8 2e-12 >seq2467 Length=23714 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 |||||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| Sbjct 10842 CCTGCAAAAATCAAGCGCTGTTGATCGGGAGGGATGCCTTCTTTGTCTTGAATTTTCGCC 10901 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | ||||| || | |||||| || | ||||| |||||||| || || Sbjct 10902 TTTACGTTTTCGATCGTGTCAGAAGGTTCCACTTCTAACGTAATTGTTTTACCCGTCAAC 10961 Query 134694 GTTTTAACGAAAATTTGCATTTT 134716 || || ||||| || |||||||| Sbjct 10962 GTCTTTACGAAGATCTGCATTTT 10984 Score = 100 bits (110), Expect = 3e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||||||||| | |||||||| || || ||||| || || ||||| ||||| Sbjct 9705 TTACCAGCAAAAATCAATCTTTGCTGATCAGGGGGAATGCCCTCCTTGTCTTGTATTTTA 9764 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||| || || | |||||| |||| || || || || || || ||||| || ||| Sbjct 9765 GCTTTAACATTTTCAATTGTGTCTGACGGCTCGACCTCCAGCGTGATAGTTTTTCCCGTT 9824 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 |||||||| || ||||||||||| Sbjct 9825 AAAGTTTTGACAAAAATTTGCAT 9847 Score = 96.9 bits (106), Expect = 4e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 ||||| |||||||| ||||||||||| || || || || ||||| || |||||||| Sbjct 10268 CCTGCGAAAATCAATCGCTGCTGATCCGGAGGAATCCCCTCTTTATCCTGAATTTTAGCC 10327 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | ||||| |||| ||| || || | ||||| ||||| || ||||| Sbjct 10328 TTAACATTTTCAATCGTGTCCGACGGTTCAACTTCCAACGTAATAGTTTTGCCCGTTAAC 10387 Query 134694 GTTTTAACGAAAATTTGCATT 134714 ||||| || ||||| |||||| Sbjct 10388 GTTTTGACAAAAATCTGCATT 10408 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || ||||||||||| || |||||||| || ||||| |||||||| || ||||| || | Sbjct 9990 CCGGCAAAAATCAATCGTTGCTGATCCGGAGGTATCCCTTCTTTGTCCTGAATCTTCGCT 10049 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | ||||| || | ||| || || | |||||| ||||| || || || Sbjct 10050 TTAACATTTTCAATCGTGTCCGATGGTTCAACTTCCAAAGTAATAGTTTTTCCAGTCAAT 10109 Query 134694 GTTTTAACGAAAATTTGCAT 134713 || || ||||| || ||||| Sbjct 10110 GTCTTGACGAATATCTGCAT 10129 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 |||||||| || || || ||||||||||| || || || |||||||| || || || || Sbjct 10548 TTGCCTGCGAAGATTAAGCGCTGCTGATCAGGTGGGATTCCTTCTTTGTCCTGGATCTTG 10607 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| || | || || |||| || || || | |||||| || || ||||| Sbjct 10608 GCCTTGACGTTTTCGATCGTATCAGACGGCTCAACTTCCAAAGTAATCGTCTTTCCGGTC 10667 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | |||||||||||| || ||||| Sbjct 10668 AGAGTTTTAACGAAGATCTGCAT 10690 Score = 82.4 bits (90), Expect = 8e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 ||||| ||||| || ||||| ||||| || || || |||||||| |||||||| ||| Sbjct 9414 CCTGCGAAAATTAAGCGCTGTTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCC 9473 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | || || || | |||||| || || || || || || || || | Sbjct 9474 TTAACGTTTTCTATCGTATCAGATGGTTCCACTTCAAGCGTTATCGTCTTGCCCGTGAGG 9533 Query 134694 GTTTTAACGAAAATTTGCAT 134713 || || |||||||||||||| Sbjct 9534 GTCTTCACGAAAATTTGCAT 9553 >seq259 Length=51451 Score = 96.9 bits (106), Expect = 4e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 ||| | |||||||| ||||| ||||||||||| ||||| || || ||||| ||||||||| Sbjct 9773 TGTATACCTGCAAATATCAAGCGCTGCTGATCCGGCGGAATACCCTCTTTGTCTTGAATT 9714 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || || || || | ||| || || | ||| || || | || || ||||| || Sbjct 9713 TTCGCCTTCACGTTCTCAATTGTATCAGAAGGTTCTACTTCCAATGTGATCGTTTTTCCA 9654 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| ||||| |||||||| Sbjct 9653 GTCAACGTTTTGACGAAGATTTGCAT 9628 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 |||||||| || || |||||||||||||| || || |||||||| |||||||| || | Sbjct 12537 CCTGCAAATATTAAGCGCTGCTGATCGGGAGGGATTCCTTCTTTGTCTTGAATCTTGGCT 12478 Query 134634 TTGACCGCGTCCAAT-GTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAA 134692 || | || | |||| || || || | || || || || ||||| || || ||||| | Sbjct 12477 TTCA-CGTTTTCAATGGTATCAGATGGCTCAACTTCAAGGGTAATCGTCTTGCCGGTCAG 12419 Query 134693 AGTTTTAACGAAAATTTGCAT 134713 ||||| ||||| || ||||| Sbjct 12418 GGTTTTGACGAATATCTGCAT 12398 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 |||||||||||||| |||||||| || || || || ||||| || |||||||| || Sbjct 11669 CCTGCAAAAATCAAGCGCTGCTGGTCTGGTGGAATCCCTTCCTTATCTTGAATCTTAGCC 11610 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | || || || | ||| || || | |||||| ||||| ||||| | Sbjct 11609 TTAACATTCTCTATGGTATCAGAAGGTTCAACCTCCAAAGTAATCGTTTTGCCGGTAAGC 11550 Query 134694 GTTTTAACGAAAATTTGCAT 134713 || || |||||||| ||||| Sbjct 11549 GTCTTTACGAAAATCTGCAT 11530 >seq4487 Length=16325 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/141 (75%), Gaps = 4/141 (3%) Strand=Plus/Plus Query 8659 GAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAA-TTGGGCAC 8717 |||||| | ||| ||| || || |||||||||||| || ||| |||| || || || | Sbjct 2777 GAAACGATCTATCACGCTGCTTTGGAAGCCAGCTGTGAA-TTGGCCGAAAAGTTTGGACC 2835 Query 8718 GTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAA 8777 ||||||| |||| || | |||| |||| ||||| ||||| |||||||||||||| Sbjct 2836 GTACGAAACGTATCAAGGGTGTCCTGTCAGCAAGGGAATCTTGCAGTACGACATGTGGAA 2895 Query 8778 TGTCACGCCCACC--TCTTTG 8796 ||| | || ||| |||||| Sbjct 2896 TGTGATTCCTACCGATCTTTG 2916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505257292766720