Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq4487 111 2e-19 seq9041 89.7 7e-13 >seq4487 Length=16325 Score = 111 bits (122), Expect = 2e-19 Identities = 193/276 (70%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 68880 CCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACT 68939 ||| ||||||||||| | || | |||||||| | ||||| || | ||||| || || Sbjct 2923 CCAGTCCCAAAGATCGGTAGGAATCACATTCCACATGTCGTACTGCAAGATTCCCTTGCT 2864 Query 68940 TGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGC 68999 || | || | ||| ||||| || ||||| || ||| || | |||||| || || Sbjct 2863 GACAGGACACCCTTGATACGTTTCGTACGGTCCAAACTTTTCGGCCAATTCACAGCTGGC 2804 Query 69000 CTCTAATGCACCGTAATAAATTGTTTCGAAAATCT-TC--TTATTGAGATCTTGTGCTTC 69056 || || ||| ||| ||| || ||||| ||||||| || ||| || || | ||| Sbjct 2803 TTCCAAAGCAGCGTGATAGATCGTTTCAAAAATCTGTCGGTTAAGCAGGGCTGCTTCTT- 2745 Query 69057 TAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAAT 69116 | ||| ||||| ||| | | ||||||||| ||||| |||| |||||||| || || Sbjct 2744 TTGAC--TCGAACTCATAGCGCATAAGAATAAAGGCATCGGCCAGCCCCTGAACACCTAT 2687 Query 69117 ACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGC 69152 || || |||| |||||| |||| || |||| || Sbjct 2686 TCCTATTGGTCGATGTCTTCTATTGGATTTTTCGGC 2651 >seq9041 Length=8032 Score = 89.7 bits (98), Expect = 7e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 70344 tttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTC 70403 |||||| |||||||| |||||||| | ||| ||||| || || || ||||||||||| Sbjct 6427 TTTTTTAGTTTCCTTATGTAAATTACTGACGGCAATTCTAGCAGCCAGTATAGCATAGTC 6368 Query 70404 AGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGT 70463 ||||| | || || |||||| || | ||| || |||| |||| ||||| | ||| Sbjct 6367 GGGATGCTTAGTCGTCATAGTAGCAGCAACTTCAGCGGCTAGGTTATCCAATTCAACAGT 6308 Query 70464 TGTAACTCCGTTATATA 70480 ||||| || |||||| Sbjct 6307 CGTAACACCAGTATATA 6291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686717015063040