Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq259 140 4e-28 seq2467 122 1e-22 >seq259 Length=51451 Score = 140 bits (154), Expect = 4e-28 Identities = 119/147 (81%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || |||||||| || ||||| || |||||||| ||| | ||||| ||| || Sbjct 11820 ATGCAGATTTTTGTCAAAACCCTTACAGGAAAGACTATAACTTTGGAGGTAGAGCCATCA 11879 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| |||| | || || |||||||| ||||| ||||||||||||||||| ||| Sbjct 11880 GATACGATTGAAAATGTCAAAGCCAAAATTCAAGACAAAGAGGGAATTCCTCCAGATCAG 11939 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAA 27552 || || ||||| |||||||||| |||| Sbjct 11940 CAACGACTAATCTTTGCTGGTATGCAA 11966 Score = 125 bits (138), Expect = 8e-24 Identities = 113/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||||||||||||||| || |||||| | |||||||| | | Sbjct 11530 ATGCAGATTTTCGTAAAGACGCTTACCGGCAAAACGATTACTTTGGAGGTTGAACCTTCT 11589 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | |||||||| ||||| || ||||| || ||||| ||||||||| Sbjct 11590 GATACCATAGAGAATGTTAAGGCTAAGATTCAAGATAAGGAAGGGATTCCACCAGACCAG 11649 Query 27526 CAGCGTCTAATTTTTGCTGGTA 27547 ||||| | |||||||| |||| Sbjct 11650 CAGCGCTTGATTTTTGCAGGTA 11671 Score = 125 bits (138), Expect = 8e-24 Identities = 113/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||| || || ||||||||||| ||||| ||||| |||||| || | Sbjct 12398 ATGCAGATATTCGTCAAAACCCTGACCGGCAAGACGATTACCCTTGAAGTTGAGCCATCT 12457 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| |||| || || ||||| ||||| || ||||| ||||| || ||| Sbjct 12458 GATACCATTGAAAACGTGAAAGCCAAGATTCAAGACAAAGAAGGAATCCCTCCCGATCAG 12517 Query 27526 CAGCGTCTAATTTTTGCTGGTA 27547 ||||| |||| ||||| |||| Sbjct 12518 CAGCGCTTAATATTTGCAGGTA 12539 Score = 125 bits (138), Expect = 8e-24 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||||||||||||||| |||||||| ||||| | || ||||| || Sbjct 12675 AATGCAAATTTTTGTCAAGACGCTTACAGGCAAGACAATTACCTTGGAAGTTGAAGCATC 12734 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| |||| | ||||| || |||||||| || || || |||||||| || || Sbjct 12735 GGACACGATTGAAAATGTTAAGGCGAAGATTCAGGATAAAGAAGGGATTCCTCCGGATCA 12794 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAAC 27553 ||| | || |||||||| |||||| ||| Sbjct 12795 ACAGAGACTTATTTTTGCAGGTAAGGAAC 12823 Score = 113 bits (124), Expect = 5e-20 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || || || || ||||| ||||||||||| || | ||||| ||| | Sbjct 12956 AATGCAAATATTCGTTAAAACTCTTACTGGCAAGACTATAACATTGGAGGTCGAGCCGTC 13015 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | || | ||| ||||||| || ||||||||||| ||||| ||||| || || || Sbjct 13016 TGACACAATCGAAAACGTGAAGGCAAAGATTCAGGACAAAGAGGGCATTCCACCTGATCA 13075 Query 27525 GCAGCGTCTAATTTTTGCTGGT 27546 ||||| ||||| ||||||||| Sbjct 13076 ACAGCGACTAATATTTGCTGGT 13097 Score = 104 bits (114), Expect = 3e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| || || ||||| || || ||| | || || ||| | Sbjct 12105 ATGCAAATTTTCGTAAAGACCCTCACAGGCAAAACGATCACTTTAGAAGTCGAGCCTTCA 12164 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| |||| | || || || |||||||| || || |||||||| || || ||| Sbjct 12165 GATACCATTGAAAATGTTAAAGCAAAGATTCAGGATAAAGAAGGAATTCCACCTGATCAG 12224 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGC 27550 || || || ||||||||||||| || Sbjct 12225 CAACGACTTATTTTTGCTGGTATGC 12249 Score = 91.5 bits (100), Expect = 2e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||||||||| ||||| ||| | || || || || || || | || || || | Sbjct 9625 ATCATGCAAATCTTCGTCAAAACGTTGACTGGAAAAACGATCACATTGGAAGTAGAACCT 9684 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||||| |||| || ||||||| |||||||| ||||| ||||| ||||| || || Sbjct 9685 TCTGATACAATTGAGAACGTGAAGGCGAAAATTCAAGACAAAGAGGGTATTCCGCCGGAT 9744 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTC 27555 |||||||| | || ||||| |||| ||| || Sbjct 9745 CAGCAGCGCTTGATATTTGCAGGTATACAATTC 9777 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || ||||| || | || || || || || ||| | ||||| ||| || Sbjct 11252 AATGCAGATTTTCGTCAAAACCTTGACGGGTAAAACAATAACTTTGGAGGTCGAGCCATC 11311 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| || | ||| | || || ||||||||||| || || |||||||| || || || Sbjct 11312 TGATACGATCGAAAACGTAAAAGCAAAAATTCAGGATAAAGAAGGAATTCCACCTGATCA 11371 Query 27525 GCAGCGTCTAATTTTTGCTGGTA 27547 |||| | |||| ||||| |||| Sbjct 11372 GCAGAGATTAATCTTTGCAGGTA 11394 >seq2467 Length=23714 Score = 122 bits (134), Expect = 1e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| |||||||| ||||| ||||||||||||||||| | ||||| ||| | Sbjct 9275 AATGCAAATATTTGTCAAAACGCTCACCGGCAAGACTATTACGTTGGAGGTAGAGCCGTC 9216 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| |||| ||| | |||||||||||||| ||||||||||| ||||| || || || Sbjct 9215 GGATACAATTGAAAACGTAAAGGCTAAAATTCAAGACAAGGAGGGCATTCCACCTGATCA 9156 Query 27525 GCAGCGTCTAATTTTTGCTGGT 27546 ||| | | || || |||||| Sbjct 9155 ACAGAGGTTGATATTCGCTGGT 9134 Score = 109 bits (120), Expect = 6e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || |||||||| ||| | || ||||| |||||||| | || ||||| | Sbjct 10408 AATGCAGATTTTTGTCAAAACGTTAACGGGCAAAACTATTACGTTGGAAGTTGAACCGTC 10349 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| |||| | ||||||||||||||||| || ||||| |||||||| || || Sbjct 10348 GGACACGATTGAAAATGTTAAGGCTAAAATTCAGGATAAAGAGGGGATTCCTCCGGATCA 10289 Query 27525 GCAGCGTCTAATTTTTGCTGGTA 27547 |||||| | ||||| || |||| Sbjct 10288 GCAGCGATTGATTTTCGCAGGTA 10266 Score = 104 bits (114), Expect = 3e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| || || |||||||| || || ||||| || || || | Sbjct 9553 ATGCAAATTTTCGTGAAGACCCTCACGGGCAAGACGATAACGCTTGAAGTGGAACCATCT 9494 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | ||||| || ||||| ||||| || ||||||||||| || || Sbjct 9493 GATACGATAGAAAACGTTAAGGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCAA 9434 Query 27526 CAGCGTCTAATTTTTGCTGGTA 27547 ||||| ||||||| || |||| Sbjct 9433 CAGCGCTTAATTTTCGCAGGTA 9412 Score = 100 bits (110), Expect = 3e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| |||||||| || | || || || ||||| || || ||||| ||| | Sbjct 9847 ATGCAAATTTTTGTCAAAACTTTAACGGGAAAAACTATCACGCTGGAGGTCGAGCCGTCA 9788 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | || |||||||| || ||||||||||| ||||| || || ||| Sbjct 9787 GACACAATTGAAAATGTTAAAGCTAAAATACAAGACAAGGAGGGCATTCCCCCTGATCAG 9728 Query 27526 CAGCGTCTAATTTTTGCTGGTAA 27548 || | | |||||||||||||| Sbjct 9727 CAAAGATTGATTTTTGCTGGTAA 9705 Score = 89.7 bits (98), Expect = 6e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | || || || ||||||||| | || ||||| || Sbjct 10129 ATGCAGATATTCGTCAAGACATTGACTGGAAAAACTATTACTTTGGAAGTTGAACCATCG 10070 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | || || || ||||||||||| || || || ||||| || ||| Sbjct 10069 GACACGATTGAAAATGTTAAAGCGAAGATTCAGGACAAAGAAGGGATACCTCCGGATCAG 10010 Query 27526 CAGCGTCTAATTTTTGCTGGTA 27547 || || | |||||||| |||| Sbjct 10009 CAACGATTGATTTTTGCCGGTA 9988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570151169336320