Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12]
22,336 sequences; 218,332,512 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq259 140 4e-28
seq2467 122 1e-22
>seq259
Length=51451
Score = 140 bits (154), Expect = 4e-28
Identities = 119/147 (81%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || |||||||| || ||||| || |||||||| ||| | ||||| ||| ||
Sbjct 11820 ATGCAGATTTTTGTCAAAACCCTTACAGGAAAGACTATAACTTTGGAGGTAGAGCCATCA 11879
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| |||| | || || |||||||| ||||| ||||||||||||||||| |||
Sbjct 11880 GATACGATTGAAAATGTCAAAGCCAAAATTCAAGACAAAGAGGGAATTCCTCCAGATCAG 11939
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAA 27552
|| || ||||| |||||||||| ||||
Sbjct 11940 CAACGACTAATCTTTGCTGGTATGCAA 11966
Score = 125 bits (138), Expect = 8e-24
Identities = 113/142 (80%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||||||||||||||| || |||||| | |||||||| | |
Sbjct 11530 ATGCAGATTTTCGTAAAGACGCTTACCGGCAAAACGATTACTTTGGAGGTTGAACCTTCT 11589
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | ||| | |||||||| ||||| || ||||| || ||||| |||||||||
Sbjct 11590 GATACCATAGAGAATGTTAAGGCTAAGATTCAAGATAAGGAAGGGATTCCACCAGACCAG 11649
Query 27526 CAGCGTCTAATTTTTGCTGGTA 27547
||||| | |||||||| ||||
Sbjct 11650 CAGCGCTTGATTTTTGCAGGTA 11671
Score = 125 bits (138), Expect = 8e-24
Identities = 113/142 (80%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || ||||| || || ||||||||||| ||||| ||||| |||||| || |
Sbjct 12398 ATGCAGATATTCGTCAAAACCCTGACCGGCAAGACGATTACCCTTGAAGTTGAGCCATCT 12457
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| ||| |||| || || ||||| ||||| || ||||| ||||| || |||
Sbjct 12458 GATACCATTGAAAACGTGAAAGCCAAGATTCAAGACAAAGAAGGAATCCCTCCCGATCAG 12517
Query 27526 CAGCGTCTAATTTTTGCTGGTA 27547
||||| |||| ||||| ||||
Sbjct 12518 CAGCGCTTAATATTTGCAGGTA 12539
Score = 125 bits (138), Expect = 8e-24
Identities = 117/149 (79%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| ||||||||||||||||| |||||||| ||||| | || ||||| ||
Sbjct 12675 AATGCAAATTTTTGTCAAGACGCTTACAGGCAAGACAATTACCTTGGAAGTTGAAGCATC 12734
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | |||| |||| | ||||| || |||||||| || || || |||||||| || ||
Sbjct 12735 GGACACGATTGAAAATGTTAAGGCGAAGATTCAGGATAAAGAAGGGATTCCTCCGGATCA 12794
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAAC 27553
||| | || |||||||| |||||| |||
Sbjct 12795 ACAGAGACTTATTTTTGCAGGTAAGGAAC 12823
Score = 113 bits (124), Expect = 5e-20
Identities = 110/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| || || || || ||||| ||||||||||| || | ||||| ||| |
Sbjct 12956 AATGCAAATATTCGTTAAAACTCTTACTGGCAAGACTATAACATTGGAGGTCGAGCCGTC 13015
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | || | ||| ||||||| || ||||||||||| ||||| ||||| || || ||
Sbjct 13016 TGACACAATCGAAAACGTGAAGGCAAAGATTCAGGACAAAGAGGGCATTCCACCTGATCA 13075
Query 27525 GCAGCGTCTAATTTTTGCTGGT 27546
||||| ||||| |||||||||
Sbjct 13076 ACAGCGACTAATATTTGCTGGT 13097
Score = 104 bits (114), Expect = 3e-17
Identities = 110/145 (76%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| || || ||||| || || ||| | || || ||| |
Sbjct 12105 ATGCAAATTTTCGTAAAGACCCTCACAGGCAAAACGATCACTTTAGAAGTCGAGCCTTCA 12164
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| |||| | || || || |||||||| || || |||||||| || || |||
Sbjct 12165 GATACCATTGAAAATGTTAAAGCAAAGATTCAGGATAAAGAAGGAATTCCACCTGATCAG 12224
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGC 27550
|| || || ||||||||||||| ||
Sbjct 12225 CAACGACTTATTTTTGCTGGTATGC 12249
Score = 91.5 bits (100), Expect = 2e-13
Identities = 112/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||||||||| ||||| ||| | || || || || || || | || || || |
Sbjct 9625 ATCATGCAAATCTTCGTCAAAACGTTGACTGGAAAAACGATCACATTGGAAGTAGAACCT 9684
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
||||| |||| || ||||||| |||||||| ||||| ||||| ||||| || ||
Sbjct 9685 TCTGATACAATTGAGAACGTGAAGGCGAAAATTCAAGACAAAGAGGGTATTCCGCCGGAT 9744
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTC 27555
|||||||| | || ||||| |||| ||| ||
Sbjct 9745 CAGCAGCGCTTGATATTTGCAGGTATACAATTC 9777
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || || ||||| || | || || || || || ||| | ||||| ||| ||
Sbjct 11252 AATGCAGATTTTCGTCAAAACCTTGACGGGTAAAACAATAACTTTGGAGGTCGAGCCATC 11311
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| || | ||| | || || ||||||||||| || || |||||||| || || ||
Sbjct 11312 TGATACGATCGAAAACGTAAAAGCAAAAATTCAGGATAAAGAAGGAATTCCACCTGATCA 11371
Query 27525 GCAGCGTCTAATTTTTGCTGGTA 27547
|||| | |||| ||||| ||||
Sbjct 11372 GCAGAGATTAATCTTTGCAGGTA 11394
>seq2467
Length=23714
Score = 122 bits (134), Expect = 1e-22
Identities = 112/142 (79%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| |||||||| ||||| ||||||||||||||||| | ||||| ||| |
Sbjct 9275 AATGCAAATATTTGTCAAAACGCTCACCGGCAAGACTATTACGTTGGAGGTAGAGCCGTC 9216
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| |||| ||| | |||||||||||||| ||||||||||| ||||| || || ||
Sbjct 9215 GGATACAATTGAAAACGTAAAGGCTAAAATTCAAGACAAGGAGGGCATTCCACCTGATCA 9156
Query 27525 GCAGCGTCTAATTTTTGCTGGT 27546
||| | | || || ||||||
Sbjct 9155 ACAGAGGTTGATATTCGCTGGT 9134
Score = 109 bits (120), Expect = 6e-19
Identities = 110/143 (77%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || |||||||| ||| | || ||||| |||||||| | || ||||| |
Sbjct 10408 AATGCAGATTTTTGTCAAAACGTTAACGGGCAAAACTATTACGTTGGAAGTTGAACCGTC 10349
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | |||| |||| | ||||||||||||||||| || ||||| |||||||| || ||
Sbjct 10348 GGACACGATTGAAAATGTTAAGGCTAAAATTCAGGATAAAGAGGGGATTCCTCCGGATCA 10289
Query 27525 GCAGCGTCTAATTTTTGCTGGTA 27547
|||||| | ||||| || ||||
Sbjct 10288 GCAGCGATTGATTTTCGCAGGTA 10266
Score = 104 bits (114), Expect = 3e-17
Identities = 108/142 (76%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| || || |||||||| || || ||||| || || || |
Sbjct 9553 ATGCAAATTTTCGTGAAGACCCTCACGGGCAAGACGATAACGCTTGAAGTGGAACCATCT 9494
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | ||| | ||||| || ||||| ||||| || ||||||||||| || ||
Sbjct 9493 GATACGATAGAAAACGTTAAGGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCAA 9434
Query 27526 CAGCGTCTAATTTTTGCTGGTA 27547
||||| ||||||| || ||||
Sbjct 9433 CAGCGCTTAATTTTCGCAGGTA 9412
Score = 100 bits (110), Expect = 3e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| |||||||| || | || || || ||||| || || ||||| ||| |
Sbjct 9847 ATGCAAATTTTTGTCAAAACTTTAACGGGAAAAACTATCACGCTGGAGGTCGAGCCGTCA 9788
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| |||| | || |||||||| || ||||||||||| ||||| || || |||
Sbjct 9787 GACACAATTGAAAATGTTAAAGCTAAAATACAAGACAAGGAGGGCATTCCCCCTGATCAG 9728
Query 27526 CAGCGTCTAATTTTTGCTGGTAA 27548
|| | | ||||||||||||||
Sbjct 9727 CAAAGATTGATTTTTGCTGGTAA 9705
Score = 89.7 bits (98), Expect = 6e-13
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| | || || || ||||||||| | || ||||| ||
Sbjct 10129 ATGCAGATATTCGTCAAGACATTGACTGGAAAAACTATTACTTTGGAAGTTGAACCATCG 10070
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| |||| | || || || ||||||||||| || || || ||||| || |||
Sbjct 10069 GACACGATTGAAAATGTTAAAGCGAAGATTCAGGACAAAGAAGGGATACCTCCGGATCAG 10010
Query 27526 CAGCGTCTAATTTTTGCTGGTA 27547
|| || | |||||||| ||||
Sbjct 10009 CAACGATTGATTTTTGCCGGTA 9988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570151169336320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |