Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq259 125 6e-24 seq2467 118 9e-22 >seq259 Length=51451 Score = 125 bits (138), Expect = 6e-24 Identities = 108/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||||||||| || ||||| |||||||||||| | ||||| |||||||| || || || Sbjct 12397 CATGCAGATATTCGTCAAAACCCTGACCGGCAAGACGATTACCCTTGAAGTTGAGCCATC 12456 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||| | || ||| || ||||||||||||||||| || || |||||||| Sbjct 12457 TGATACCATTGAAAACGTGAAAGCCAAGATTCAAGACAAAGAAGGAATCCCTCCCGATCA 12516 Query 27107 ACAGCGTTTAATAT 27120 ||||| ||||||| Sbjct 12517 GCAGCGCTTAATAT 12530 Score = 100 bits (110), Expect = 2e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| ||||| || |||||||| || |||||| |||| || | || || || ||||| Sbjct 12957 ATGCAAATATTCGTTAAAACTCTTACTGGCAAGACTATAACATTGGAGGTCGAGCCGTCT 13016 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||| ||||| |||||||| ||||| ||||| |||||| Sbjct 13017 GACACAATCGAAAACGTGAAGGCAAAGATTCAGGACAAAGAGGGCATTCCACCTGATCAA 13076 Query 27108 CAGCGTTTAATAT 27120 ||||| |||||| Sbjct 13077 CAGCGACTAATAT 13089 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| ||||| || || || ||| |||| ||| | || || || || || Sbjct 11819 CATGCAGATTTTTGTCAAAACCCTTACAGGAAAGACTATAACTTTGGAGGTAGAGCCATC 11878 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || ||||||| | |||||| ||||||||||||||||| || || || || ||||| Sbjct 11879 AGATACGATTGAAAATGTCAAAGCCAAAATTCAAGACAAAGAGGGAATTCCTCCAGATCA 11938 Query 27107 ACAGCGTTTAAT 27118 || || |||| Sbjct 11939 GCAACGACTAAT 11950 Score = 86.0 bits (94), Expect = 5e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || ||||| |||| || || | || || | ||||| ||||| || Sbjct 9627 CATGCAAATCTTCGTCAAAACGTTGACTGGAAAAACGATCACATTGGAAGTAGAACCTTC 9686 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||||| || || ||||||||||||||||| || || || || ||||| Sbjct 9687 TGATACAATTGAGAACGTGAAGGCGAAAATTCAAGACAAAGAGGGTATTCCGCCGGATCA 9746 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATT 27136 ||||| || |||| || || | |||||| Sbjct 9747 GCAGCGCTTGATATTTGCAGGTATACAATT 9776 >seq2467 Length=23714 Score = 118 bits (130), Expect = 9e-22 Identities = 125/164 (76%), Gaps = 3/164 (2%) Strand=Plus/Minus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| || || |||||||||||||| ||| | |||||| | ||||| || || Sbjct 10694 CGGCATGCAGATCTTCGTTAAAACTCTGACCGGAAAGACGATTACTTTGGAAGTTGAGCC 10635 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 ||| || |||| || | ||||| || || || ||||||||||| || ||||| || Sbjct 10634 GTCTGATACGATCGAAAACGTCAAGGCCAAGATCCAGGACAAAGAAGGAATCCCACCTGA 10575 Query 27104 TCAACAGCGTTTAATATACGCCGGCAA---ACAATTGGAAGACA 27144 ||| ||||| ||||| | ||| ||||| | || |||||||| Sbjct 10574 TCAGCAGCGCTTAATCTTCGCAGGCAAGTGATTATCGGAAGACA 10531 Score = 109 bits (120), Expect = 5e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| ||||| || ||||||||| ||||||| | || || || ||||| Sbjct 9274 ATGCAAATATTTGTCAAAACGCTCACCGGCAAGACTATTACGTTGGAGGTAGAGCCGTCG 9215 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || |||||||||||||| || ||||| ||||| |||||| Sbjct 9214 GATACAATTGAAAACGTAAAGGCTAAAATTCAAGACAAGGAGGGCATTCCACCTGATCAA 9155 Query 27108 CAGCGTTTAATATACGCCGG 27127 ||| | || |||| ||| || Sbjct 9154 CAGAGGTTGATATTCGCTGG 9135 Score = 105 bits (116), Expect = 6e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || ||||| || |||| || || | ||||| | ||||||||||| || Sbjct 10981 ATGCAGATCTTCGTAAAGACGTTGACGGGTAAAACAATTACGTTAGAAGTGGAACCTTCT 10922 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || ||||||||||||||||||||||| || ||||||||| Sbjct 10921 GACACGATCGAAAACGTAAAGGCGAAAATTCAAGACAAAGAAGGCATCCCTCCCGATCAA 10862 Query 27108 CAGCGTTTAAT 27118 ||||| || || Sbjct 10861 CAGCGCTTGAT 10851 Score = 104 bits (114), Expect = 2e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || |||||| | || || |||||||||||||| || Sbjct 9553 ATGCAAATTTTCGTGAAGACCCTCACGGGCAAGACGATAACGCTTGAAGTGGAACCATCT 9494 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | || || ||| ||||||||||||||||| || || || |||||| Sbjct 9493 GATACGATAGAAAACGTTAAGGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCAA 9434 Query 27108 CAGCGTTTAATATACGCCGG 27127 ||||| ||||| | ||| || Sbjct 9433 CAGCGCTTAATTTTCGCAGG 9414 Score = 102 bits (112), Expect = 7e-17 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||||||||| || || || |||| || || |||||||| | ||||| ||||| || Sbjct 10130 CATGCAGATATTCGTCAAGACATTGACTGGAAAAACTATTACTTTGGAAGTTGAACCATC 10071 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| ||||||| | || ||| || ||||| ||||||||||| ||||| || ||||| Sbjct 10070 GGACACGATTGAAAATGTTAAAGCGAAGATTCAGGACAAAGAAGGGATACCTCCGGATCA 10011 Query 27107 ACAGCGTTTAATATACGCCGG 27127 || || || || | ||||| Sbjct 10010 GCAACGATTGATTTTTGCCGG 9990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434796970782720