Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12]
22,336 sequences; 218,332,512 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq259 125 6e-24
seq2467 118 9e-22
>seq259
Length=51451
Score = 125 bits (138), Expect = 6e-24
Identities = 108/134 (81%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||||||||| || ||||| |||||||||||| | ||||| |||||||| || || ||
Sbjct 12397 CATGCAGATATTCGTCAAAACCCTGACCGGCAAGACGATTACCCTTGAAGTTGAGCCATC 12456
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | ||||| | || ||| || ||||||||||||||||| || || ||||||||
Sbjct 12457 TGATACCATTGAAAACGTGAAAGCCAAGATTCAAGACAAAGAAGGAATCCCTCCCGATCA 12516
Query 27107 ACAGCGTTTAATAT 27120
||||| |||||||
Sbjct 12517 GCAGCGCTTAATAT 12530
Score = 100 bits (110), Expect = 2e-16
Identities = 102/133 (77%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| ||||| || |||||||| || |||||| |||| || | || || || |||||
Sbjct 12957 ATGCAAATATTCGTTAAAACTCTTACTGGCAAGACTATAACATTGGAGGTCGAGCCGTCT 13016
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || ||| ||||| |||||||| ||||| ||||| ||||||
Sbjct 13017 GACACAATCGAAAACGTGAAGGCAAAGATTCAGGACAAAGAGGGCATTCCACCTGATCAA 13076
Query 27108 CAGCGTTTAATAT 27120
||||| ||||||
Sbjct 13077 CAGCGACTAATAT 13089
Score = 95.1 bits (104), Expect = 1e-14
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| ||||| || || || ||| |||| ||| | || || || || ||
Sbjct 11819 CATGCAGATTTTTGTCAAAACCCTTACAGGAAAGACTATAACTTTGGAGGTAGAGCCATC 11878
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| ||||||| | |||||| ||||||||||||||||| || || || || |||||
Sbjct 11879 AGATACGATTGAAAATGTCAAAGCCAAAATTCAAGACAAAGAGGGAATTCCTCCAGATCA 11938
Query 27107 ACAGCGTTTAAT 27118
|| || ||||
Sbjct 11939 GCAACGACTAAT 11950
Score = 86.0 bits (94), Expect = 5e-12
Identities = 109/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||| || || || ||||| |||| || || | || || | ||||| ||||| ||
Sbjct 9627 CATGCAAATCTTCGTCAAAACGTTGACTGGAAAAACGATCACATTGGAAGTAGAACCTTC 9686
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | ||||||| || || ||||||||||||||||| || || || || |||||
Sbjct 9687 TGATACAATTGAGAACGTGAAGGCGAAAATTCAAGACAAAGAGGGTATTCCGCCGGATCA 9746
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATT 27136
||||| || |||| || || | ||||||
Sbjct 9747 GCAGCGCTTGATATTTGCAGGTATACAATT 9776
>seq2467
Length=23714
Score = 118 bits (130), Expect = 9e-22
Identities = 125/164 (76%), Gaps = 3/164 (2%)
Strand=Plus/Minus
Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043
|| ||||||||| || || |||||||||||||| ||| | |||||| | ||||| || ||
Sbjct 10694 CGGCATGCAGATCTTCGTTAAAACTCTGACCGGAAAGACGATTACTTTGGAAGTTGAGCC 10635
Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103
||| || |||| || | ||||| || || || ||||||||||| || ||||| ||
Sbjct 10634 GTCTGATACGATCGAAAACGTCAAGGCCAAGATCCAGGACAAAGAAGGAATCCCACCTGA 10575
Query 27104 TCAACAGCGTTTAATATACGCCGGCAA---ACAATTGGAAGACA 27144
||| ||||| ||||| | ||| ||||| | || ||||||||
Sbjct 10574 TCAGCAGCGCTTAATCTTCGCAGGCAAGTGATTATCGGAAGACA 10531
Score = 109 bits (120), Expect = 5e-19
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| |||||||| ||||| || ||||||||| ||||||| | || || || |||||
Sbjct 9274 ATGCAAATATTTGTCAAAACGCTCACCGGCAAGACTATTACGTTGGAGGTAGAGCCGTCG 9215
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || |||||||||||||| || ||||| ||||| ||||||
Sbjct 9214 GATACAATTGAAAACGTAAAGGCTAAAATTCAAGACAAGGAGGGCATTCCACCTGATCAA 9155
Query 27108 CAGCGTTTAATATACGCCGG 27127
||| | || |||| ||| ||
Sbjct 9154 CAGAGGTTGATATTCGCTGG 9135
Score = 105 bits (116), Expect = 6e-18
Identities = 102/131 (78%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || ||||| || |||| || || | ||||| | ||||||||||| ||
Sbjct 10981 ATGCAGATCTTCGTAAAGACGTTGACGGGTAAAACAATTACGTTAGAAGTGGAACCTTCT 10922
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | || || ||||||||||||||||||||||| || |||||||||
Sbjct 10921 GACACGATCGAAAACGTAAAGGCGAAAATTCAAGACAAAGAAGGCATCCCTCCCGATCAA 10862
Query 27108 CAGCGTTTAAT 27118
||||| || ||
Sbjct 10861 CAGCGCTTGAT 10851
Score = 104 bits (114), Expect = 2e-17
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || || || |||||| | || || |||||||||||||| ||
Sbjct 9553 ATGCAAATTTTCGTGAAGACCCTCACGGGCAAGACGATAACGCTTGAAGTGGAACCATCT 9494
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| |||| || | || || ||| ||||||||||||||||| || || || ||||||
Sbjct 9493 GATACGATAGAAAACGTTAAGGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCAA 9434
Query 27108 CAGCGTTTAATATACGCCGG 27127
||||| ||||| | ||| ||
Sbjct 9433 CAGCGCTTAATTTTCGCAGG 9414
Score = 102 bits (112), Expect = 7e-17
Identities = 107/141 (76%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||||||||| || || || |||| || || |||||||| | ||||| ||||| ||
Sbjct 10130 CATGCAGATATTCGTCAAGACATTGACTGGAAAAACTATTACTTTGGAAGTTGAACCATC 10071
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| ||||||| | || ||| || ||||| ||||||||||| ||||| || |||||
Sbjct 10070 GGACACGATTGAAAATGTTAAAGCGAAGATTCAGGACAAAGAAGGGATACCTCCGGATCA 10011
Query 27107 ACAGCGTTTAATATACGCCGG 27127
|| || || || | |||||
Sbjct 10010 GCAACGATTGATTTTTGCCGG 9990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434796970782720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |