Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq259 91.5 1e-13 seq2467 89.7 3e-13 >seq259 Length=51451 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||||| || || || ||||| || || |||||||| | | Sbjct 12398 ATGCAGATATTCGTCAAAACCCTGACCGGCAAGACGATTACCCTTGAAGTTGAGCCATCT 12457 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| | ||| || ||| ||||||||||| | || || ||||| Sbjct 12458 GATACCATTGAAAACGTGAAAGCCAAGATTCAAGACAAAGAAGGAATCCCTCCCGATCAG 12517 Query 23731 CAGCGTTTAATATTTGCCGG 23750 ||||| ||||||||||| || Sbjct 12518 CAGCGCTTAATATTTGCAGG 12537 Score = 84.2 bits (92), Expect = 1e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| |||||| | ||||| ||||| || ||| | || || || | | Sbjct 11252 AATGCAGATTTTCGTCAAAACCTTGACGGGTAAAACAATAACTTTGGAGGTCGAGCCATC 11311 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | |||| ||||| ||||||| || |||||||| | || || ||||| Sbjct 11312 TGATACGATCGAAAACGTAAAAGCAAAAATTCAGGATAAAGAAGGAATTCCACCTGATCA 11371 Query 23730 ACAGCGTTTAATATTTGCCGG 23750 ||| | ||||| ||||| || Sbjct 11372 GCAGAGATTAATCTTTGCAGG 11392 >seq2467 Length=23714 Score = 89.7 bits (98), Expect = 3e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || | || |||||||| || ||| | |||||||| | || Sbjct 10129 ATGCAGATATTCGTCAAGACATTGACTGGAAAAACTATTACTTTGGAAGTTGAACCATCG 10070 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||||| | ||||| | || | || ||||||||||| |||| || ||||| Sbjct 10069 GACACGATTGAAAATGTTAAAGCGAAGA-TTCAGGACAAAGAAGGGATACCTCCGGATCA 10011 Query 23730 ACAGCGTTTAATATTTGCCGG 23750 || || || || |||||||| Sbjct 10010 GCAACGATTGATTTTTGCCGG 9990 Score = 82.4 bits (90), Expect = 5e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| || ||||||||||| || ||||| || || ||||| || | | Sbjct 9553 ATGCAAATTTTCGTGAAGACCCTCACGGGCAAGACGATAACGCTTGAAGTGGAACCATCT 9494 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | |||| | || ||| ||| ||||||||||| | || || |||||| Sbjct 9493 GATACGATAGAAAACGTTAAGGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCAA 9434 Query 23731 CAGCGTTTAATATTTGCCGG 23750 ||||| ||||| || || || Sbjct 9433 CAGCGCTTAATTTTCGCAGG 9414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337917587026688