Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq259 100 7e-16 seq2467 91.5 4e-13 >seq259 Length=51451 Score = 100 bits (110), Expect = 7e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 ||||| || ||||||||||| || || || ||||| ||||| || || || |||||| Sbjct 12244 CCAGCAAAAATAAGTCGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATCTTTGCT 12185 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 || ||| ||| ||||| ||||| | || || ||||| |||||||| ||||| || | Sbjct 12184 TTAACATTTTCAATGGTATCTGAAGGCTCGACTTCTAAAGTGATCGTTTTGCCTGTGAGG 12125 Query 225694 GTTTTTATGAACACTTGCAT 225713 || |||| ||| | |||||| Sbjct 12124 GTCTTTACGAAAATTTGCAT 12105 >seq2467 Length=23714 Score = 91.5 bits (100), Expect = 4e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 || ||||| || | || ||||| || || ||||| ||||| |||||||| |||||| | Sbjct 9414 CCTGCGAAAATTAAGCGCTGTTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCC 9473 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 || || ||| || || || || | |||||| || | ||| |||||||||||||| | Sbjct 9474 TTAACGTTTTCTATCGTATCAGATGGTTCCACTTCAAGCGTTATCGTCTTGCCCGTGAGG 9533 Query 225694 GTTTTTATGAACACTTGCAT 225713 || || | ||| | |||||| Sbjct 9534 GTCTTCACGAAAATTTGCAT 9553 Score = 86.0 bits (94), Expect = 1e-11 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| || || | || ||| || || || ||||| || ||||||||||| || ||| Sbjct 9705 TTACCAGCAAAAATCAATCTTTGCTGATCAGGGGGAATGCCCTCCTTGTCTTGTAT-TTT 9763 Query 225631 TGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || || ||| ||| || |||||||| | || || || | |||||| || || ||||| Sbjct 9764 AGCTTTAACATTTTCAATTGTGTCTGACGGCTCGACCTCCAGCGTGATAGTTTTTCCCGT 9823 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 |||||||| | || | |||||| Sbjct 9824 TAAAGTTTTGACAAAAATTTGCAT 9847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192189921421184