Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq9041 86.0 9e-12 seq5314 84.2 3e-11 >seq9041 Length=8032 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 77347 tttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTC 77406 |||||| |||||||| |||| ||| ||||| ||||||||||| || || |||||||| Sbjct 6427 TTTTTTAGTTTCCTTATGTAAATTACTGACGGCAATTCTAGCAGCCAGTATAGCATAGTC 6368 Query 77407 AGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGT 77466 ||||| | || || || || || | ||| || |||| |||| ||||| | ||| Sbjct 6367 GGGATGCTTAGTCGTCATAGTAGCAGCAACTTCAGCGGCTAGGTTATCCAATTCAACAGT 6308 Query 77467 AGTAACTCCGTTATATA 77483 ||||| || |||||| Sbjct 6307 CGTAACACCAGTATATA 6291 >seq5314 Length=14302 Score = 84.2 bits (92), Expect = 3e-11 Identities = 202/299 (68%), Gaps = 15/299 (5%) Strand=Plus/Minus Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAA--AGATCCAGAAAAGA 46747 || ||||| || ||||| || || | |||||||||||||||||| | | ||||| | Sbjct 5665 CCCGGCATAAGACCACGTTTCTTCAACCAAAATATAGCCGCGAAGCTGCCGCTGAAAAAA 5606 Query 46748 ATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATC-ATT---- 46802 ||| ||||| || || | ||| || ||||| | || | || || || ||| Sbjct 5605 ATA--CCTTCGACGGCAGAGAAGGCAACAAG--GCGTTCAGCAAAAGGTGTCGATTTCCC 5550 Query 46803 ATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGC 46862 || ||||| || ||||| || || || ||||| ||||| |||| ||||| | || Sbjct 5549 GTGGATCCATCTCAACGCCCAGTCTGCTTTCTTCTTCACACACGGCAGCGTTTCGACGGC 5490 Query 46863 ATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTA--AAAGACTA 46920 || || || || | ||| | | | ||| | || | ||| || | || || | Sbjct 5489 GTTGAACAGCAACTCCCTTTGAGCGGGGTTTTTGATGTAAGCATCGATAAGTAACGA--A 5432 Query 46921 TACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTC 46979 ||||| || ||||| || ||||| | || |||||||| |||||||| ||| ||||| Sbjct 5431 TACATCTCAGAATGTATATTTTCCAGTGCAATCTGAAAGCCGTAAAAGTATCGCGCTTC 5373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712735348715520