Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12]
22,336 sequences; 218,332,512 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq2467 114 3e-20
seq259 104 5e-17
>seq2467
Length=23714
Score = 114 bits (126), Expect = 3e-20
Identities = 111/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019
|| ||||| ||||| || ||||| || || || || || |||||||| || || ||
Sbjct 10842 CCTGCAAAAATCAAGCGCTGTTGATCGGGAGGGATGCCTTCTTTGTCTTGAATTTTCGCC 10901
Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079
|||||| | ||||| ||||| |||| ||| ||||| | || || || |||||||||||
Sbjct 10902 TTTACGTTTTCGATCGTGTCAGAAGGTTCCACTTCTAACGTAATTGTTTTACCCGTCAAC 10961
Query 283080 GTCTTAACGAATATCTGCATTTT 283102
||||| ||||| |||||||||||
Sbjct 10962 GTCTTTACGAAGATCTGCATTTT 10984
Score = 104 bits (114), Expect = 5e-17
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019
|||||||| ||||| ||||| || || || || || || ||||| || ||||| |||
Sbjct 9990 CCGGCAAAAATCAATCGTTGCTGATCCGGAGGTATCCCTTCTTTGTCCTGAATCTTCGCT 10049
Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079
|| || | || || |||||||| | ||| ||||| | ||| || || || || |||||
Sbjct 10050 TTAACATTTTCAATCGTGTCCGATGGTTCAACTTCCAAAGTAATAGTTTTTCCAGTCAAT 10109
Query 283080 GTCTTAACGAATATCTGCAT 283099
||||| ||||||||||||||
Sbjct 10110 GTCTTGACGAATATCTGCAT 10129
Score = 98.7 bits (108), Expect = 2e-15
Identities = 113/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007
|||| || || || ||||| ||||| | ||| || ||| ||||| ||||||||||||
Sbjct 9696 TCTATTTAATTACCAGCAAAAATCAATCTTTGCTGATCAGGGGGAATGCCCTCCTTGTCT 9755
Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTC 283067
|| || || ||||| || | || || ||||| || | ||||| || || ||||| ||
Sbjct 9756 TGTATTTTAGCTTTAACATTTTCAATTGTGTCTGACGGCTCGACCTCCAGCGTGATAGTT 9815
Query 283068 TTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| ||||| || || || || |||||
Sbjct 9816 TTTCCCGTTAAAGTTTTGACAAAAATTTGCAT 9847
>seq259
Length=51451
Score = 104 bits (114), Expect = 5e-17
Identities = 111/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 282953 TTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGAT 283012
|||| | || ||||| ||||| || || || || |||||||||||| |||||||| ||
Sbjct 9774 TTGTATACCTGCAAATATCAAGCGCTGCTGATCCGGCGGAATACCCTCTTTGTCTTGAAT 9715
Query 283013 CTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACC 283072
|| || || ||| | || || || || |||| ||| ||||| | |||||||| || ||
Sbjct 9714 TTTCGCCTTCACGTTCTCAATTGTATCAGAAGGTTCTACTTCCAATGTGATCGTTTTTCC 9655
Query 283073 CGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| || || ||||| || |||||
Sbjct 9654 AGTCAACGTTTTGACGAAGATTTGCAT 9628
Score = 96.9 bits (106), Expect = 7e-15
Identities = 106/141 (75%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019
|| |||||||| || | || || ||| ||||| || || || || || || ||||||
Sbjct 11392 CCTGCAAAGATTAATCTCTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATTTTTGCT 11333
Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079
|||||| | ||||| || || || | ||||| || | ||| || || |||||||||||
Sbjct 11332 TTTACGTTTTCGATCGTATCAGATGGCTCGACCTCCAAAGTTATTGTTTTACCCGTCAAG 11273
Query 283080 GTCTTAACGAATATCTGCATT 283100
|| || ||||| |||||||||
Sbjct 11272 GTTTTGACGAAAATCTGCATT 11252
Score = 96.9 bits (106), Expect = 7e-15
Identities = 106/141 (75%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019
|| ||||| || | || ||||| ||| ||||| ||||| ||||| || ||||||||
Sbjct 13096 CCAGCAAATATTAGTCGCTGTTGATCAGGTGGAATGCCCTCTTTGTCCTGAATCTTTGCC 13037
Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079
|| ||| | ||||| ||||| || | ||||| || | || || ||||| || || | |
Sbjct 13036 TTCACGTTTTCGATTGTGTCAGACGGCTCGACCTCCAATGTTATAGTCTTGCCAGTAAGA 12977
Query 283080 GTCTTAACGAATATCTGCATT 283100
|| ||||||||||| ||||||
Sbjct 12976 GTTTTAACGAATATTTGCATT 12956
Score = 86.0 bits (94), Expect = 1e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019
|| ||||| || | ||||| || ||| ||||| || || || || || |||||||||
Sbjct 12244 CCAGCAAAAATAAGTCGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATCTTTGCT 12185
Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079
|| || | || || || || |||| |||||||| | ||||||||| || || || |
Sbjct 12184 TTAACATTTTCAATGGTATCTGAAGGCTCGACTTCTAAAGTGATCGTTTTGCCTGTGAGG 12125
Query 283080 GTCTTAACGAATATCTGCAT 283099
||||| ||||| || |||||
Sbjct 12124 GTCTTTACGAAAATTTGCAT 12105
Score = 86.0 bits (94), Expect = 1e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019
|| ||||| || || || || || || || || || || |||||||| ||||| |||
Sbjct 12537 CCTGCAAATATTAAGCGCTGCTGATCGGGAGGGATTCCTTCTTTGTCTTGAATCTTGGCT 12478
Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079
|| ||| | || || || || || | || ||||| || || |||||||| || ||||
Sbjct 12477 TTCACGTTTTCAATGGTATCAGATGGCTCAACTTCAAGGGTAATCGTCTTGCCGGTCAGG 12418
Query 283080 GTCTTAACGAATATCTGCAT 283099
|| || ||||||||||||||
Sbjct 12417 GTTTTGACGAATATCTGCAT 12398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046439644175744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |