Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2467 114 3e-20 seq259 104 5e-17 >seq2467 Length=23714 Score = 114 bits (126), Expect = 3e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || ||||| ||||| || ||||| || || || || || |||||||| || || || Sbjct 10842 CCTGCAAAAATCAAGCGCTGTTGATCGGGAGGGATGCCTTCTTTGTCTTGAATTTTCGCC 10901 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 |||||| | ||||| ||||| |||| ||| ||||| | || || || ||||||||||| Sbjct 10902 TTTACGTTTTCGATCGTGTCAGAAGGTTCCACTTCTAACGTAATTGTTTTACCCGTCAAC 10961 Query 283080 GTCTTAACGAATATCTGCATTTT 283102 ||||| ||||| ||||||||||| Sbjct 10962 GTCTTTACGAAGATCTGCATTTT 10984 Score = 104 bits (114), Expect = 5e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 |||||||| ||||| ||||| || || || || || || ||||| || ||||| ||| Sbjct 9990 CCGGCAAAAATCAATCGTTGCTGATCCGGAGGTATCCCTTCTTTGTCCTGAATCTTCGCT 10049 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 || || | || || |||||||| | ||| ||||| | ||| || || || || ||||| Sbjct 10050 TTAACATTTTCAATCGTGTCCGATGGTTCAACTTCCAAAGTAATAGTTTTTCCAGTCAAT 10109 Query 283080 GTCTTAACGAATATCTGCAT 283099 ||||| |||||||||||||| Sbjct 10110 GTCTTGACGAATATCTGCAT 10129 Score = 98.7 bits (108), Expect = 2e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 |||| || || || ||||| ||||| | ||| || ||| ||||| |||||||||||| Sbjct 9696 TCTATTTAATTACCAGCAAAAATCAATCTTTGCTGATCAGGGGGAATGCCCTCCTTGTCT 9755 Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTC 283067 || || || ||||| || | || || ||||| || | ||||| || || ||||| || Sbjct 9756 TGTATTTTAGCTTTAACATTTTCAATTGTGTCTGACGGCTCGACCTCCAGCGTGATAGTT 9815 Query 283068 TTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||| || || || || ||||| Sbjct 9816 TTTCCCGTTAAAGTTTTGACAAAAATTTGCAT 9847 >seq259 Length=51451 Score = 104 bits (114), Expect = 5e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 282953 TTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGAT 283012 |||| | || ||||| ||||| || || || || |||||||||||| |||||||| || Sbjct 9774 TTGTATACCTGCAAATATCAAGCGCTGCTGATCCGGCGGAATACCCTCTTTGTCTTGAAT 9715 Query 283013 CTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACC 283072 || || || ||| | || || || || |||| ||| ||||| | |||||||| || || Sbjct 9714 TTTCGCCTTCACGTTCTCAATTGTATCAGAAGGTTCTACTTCCAATGTGATCGTTTTTCC 9655 Query 283073 CGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || ||||| || ||||| Sbjct 9654 AGTCAACGTTTTGACGAAGATTTGCAT 9628 Score = 96.9 bits (106), Expect = 7e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || |||||||| || | || || ||| ||||| || || || || || || |||||| Sbjct 11392 CCTGCAAAGATTAATCTCTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATTTTTGCT 11333 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 |||||| | ||||| || || || | ||||| || | ||| || || ||||||||||| Sbjct 11332 TTTACGTTTTCGATCGTATCAGATGGCTCGACCTCCAAAGTTATTGTTTTACCCGTCAAG 11273 Query 283080 GTCTTAACGAATATCTGCATT 283100 || || ||||| ||||||||| Sbjct 11272 GTTTTGACGAAAATCTGCATT 11252 Score = 96.9 bits (106), Expect = 7e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || ||||| || | || ||||| ||| ||||| ||||| ||||| || |||||||| Sbjct 13096 CCAGCAAATATTAGTCGCTGTTGATCAGGTGGAATGCCCTCTTTGTCCTGAATCTTTGCC 13037 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 || ||| | ||||| ||||| || | ||||| || | || || ||||| || || | | Sbjct 13036 TTCACGTTTTCGATTGTGTCAGACGGCTCGACCTCCAATGTTATAGTCTTGCCAGTAAGA 12977 Query 283080 GTCTTAACGAATATCTGCATT 283100 || ||||||||||| |||||| Sbjct 12976 GTTTTAACGAATATTTGCATT 12956 Score = 86.0 bits (94), Expect = 1e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || ||||| || | ||||| || ||| ||||| || || || || || ||||||||| Sbjct 12244 CCAGCAAAAATAAGTCGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGAATCTTTGCT 12185 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 || || | || || || || |||| |||||||| | ||||||||| || || || | Sbjct 12184 TTAACATTTTCAATGGTATCTGAAGGCTCGACTTCTAAAGTGATCGTTTTGCCTGTGAGG 12125 Query 283080 GTCTTAACGAATATCTGCAT 283099 ||||| ||||| || ||||| Sbjct 12124 GTCTTTACGAAAATTTGCAT 12105 Score = 86.0 bits (94), Expect = 1e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || ||||| || || || || || || || || || || |||||||| ||||| ||| Sbjct 12537 CCTGCAAATATTAAGCGCTGCTGATCGGGAGGGATTCCTTCTTTGTCTTGAATCTTGGCT 12478 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 || ||| | || || || || || | || ||||| || || |||||||| || |||| Sbjct 12477 TTCACGTTTTCAATGGTATCAGATGGCTCAACTTCAAGGGTAATCGTCTTGCCGGTCAGG 12418 Query 283080 GTCTTAACGAATATCTGCAT 283099 || || |||||||||||||| Sbjct 12417 GTTTTGACGAATATCTGCAT 12398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046439644175744