Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq259 122 2e-22 seq2467 104 6e-17 >seq259 Length=51451 Score = 122 bits (134), Expect = 2e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || |||||||| ||||||||||| | || || || ||||| Sbjct 12108 CAAATTTTCGTAAAGACCCTCACAGGCAAAACGATCACTTTAGAAGTCGAGCCTTCAGAT 12167 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| |||||||||||| ||||||||||| || || || |||||| Sbjct 12168 ACCATTGAAAATGTTAAAGCAAAGATTCAGGATAAAGAAGGAATTCCACCTGATCAGCAA 12227 Query 178044 CGACTTATCTTCGCCGG 178060 |||||||| || || || Sbjct 12228 CGACTTATTTTTGCTGG 12244 Score = 98.7 bits (108), Expect = 2e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || ||||| || |||||||| || || || | ||||| || ||||| Sbjct 11823 CAGATTTTTGTCAAAACCCTTACAGGAAAGACTATAACTTTGGAGGTAGAGCCATCAGAT 11882 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| || ||||| |||||||| ||||| ||||| || |||||| Sbjct 11883 ACGATTGAAAATGTCAAAGCCAAAATTCAAGACAAAGAGGGAATTCCTCCAGATCAGCAA 11942 Query 178044 CGACTTATCTTCGCCGG 178060 ||||| ||||| || || Sbjct 11943 CGACTAATCTTTGCTGG 11959 Score = 95.1 bits (104), Expect = 3e-14 Identities = 98/127 (77%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| || || || || ||||| ||||| || || || || || Sbjct 12401 CAGATATTCGTCAAAACCCTGACCGGCAAGACGATTACCCTTGAAGTTGAGCCATCTGAT 12460 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| ||| |||||||| |||||||||||||||||||| || ||||| Sbjct 12461 ACCATTGAAAACGTGAAAGCCAAGATTCAAGACAAAGAAGGAATCCCTCCCGATCAGCAG 12520 Query 178044 CGACTTA 178050 || |||| Sbjct 12521 CG-CTTA 12526 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| |||||||| || || || || || || | ||||| || || ||| Sbjct 12960 CAAATATTCGTTAAAACTCTTACTGGCAAGACTATAACATTGGAGGTCGAGCCGTCTGAC 13019 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || |||||||||||||||||| || || || || || || || Sbjct 13020 ACAATCGAAAACGTGAAGGCAAAGATTCAGGACAAAGAGGGCATTCCACCTGATCAACAG 13079 Query 178044 CGACTTATCTTCGCCGG 178060 ||||| || || || || Sbjct 13080 CGACTAATATTTGCTGG 13096 Score = 86.0 bits (94), Expect = 2e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| ||||| | || || ||||| || || | ||||| || || || Sbjct 11256 CAGATTTTCGTCAAAACCTTGACGGGTAAAACAATAACTTTGGAGGTCGAGCCATCTGAT 11315 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| ||| ||| |||||||| ||||||||||| || || || ||||| Sbjct 11316 ACGATCGAAAACGTAAAAGCAAAAATTCAGGATAAAGAAGGAATTCCACCTGATCAGCAG 11375 Query 178044 CGACTTATCTTCGCCGG 178060 || | ||||| || || Sbjct 11376 AGATTAATCTTTGCAGG 11392 Score = 86.0 bits (94), Expect = 2e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || || || ||||| || || || ||| | || || ||| || ||| Sbjct 12679 CAAATTTTTGTCAAGACGCTTACAGGCAAGACAATTACCTTGGAAGTTGAAGCATCGGAC 12738 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||||||||| |||||||| || |||||||| || || Sbjct 12739 ACGATTGAAAATGTTAAGGCGAAGATTCAGGATAAAGAAGGGATTCCTCCGGATCAACAG 12798 Query 178044 CGACTTATCTTCGCCGGAAA 178063 ||||||| || || || || Sbjct 12799 AGACTTATTTTTGCAGGTAA 12818 >seq2467 Length=23714 Score = 104 bits (114), Expect = 6e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||||||||| || ||||| || || ||||| || || || |||||| || || Sbjct 9550 CAAATTTTCGTGAAGACCCTCACGGGCAAGACGATAACGCTTGAAGTGGAACCATCTGAT 9491 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || ||||||||| |||||||||||||| ||||| || || || Sbjct 9490 ACGATAGAAAACGTTAAGGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCAACAG 9431 Query 178044 CGACTTATCTTCGCCGG 178060 || | || ||||| || Sbjct 9430 CGCTTAATTTTCGCAGG 9414 Score = 100 bits (110), Expect = 7e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| |||||||| || ||||| ||||| || | || || || || || Sbjct 10687 CAGATCTTCGTTAAAACTCTGACCGGAAAGACGATTACTTTGGAAGTTGAGCCGTCTGAT 10628 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| |||||||||||||||||||| || || ||||| Sbjct 10627 ACGATCGAAAACGTCAAGGCCAAGATCCAGGACAAAGAAGGAATCCCACCTGATCAGCAG 10568 Query 178044 CGACTTATCTTCGCCGGAAA 178063 || | |||||||| || || Sbjct 10567 CGCTTAATCTTCGCAGGCAA 10548 Score = 95.1 bits (104), Expect = 3e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || |||||||| || || | || || ||| || ||| Sbjct 10126 CAGATATTCGTCAAGACATTGACTGGAAAAACTATTACTTTGGAAGTTGAACCATCGGAC 10067 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| |||||||||||||||||||| || |||||||| |||||| Sbjct 10066 ACGATTGAAAATGTTAAAGCGAAGATTCAGGACAAAGAAGGGATACCTCCGGATCAGCAA 10007 Query 178044 CGACTTATCTTCGCCGG 178060 ||| | || || ||||| Sbjct 10006 CGATTGATTTTTGCCGG 9990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203386716205184