Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq964 84.2 2e-11 >seq964 Length=244507 Score = 84.2 bits (92), Expect = 2e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 16194 ACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAA 16253 |||| ||||| |||||||||| || ||||||||||||| | ||| || ||||| Sbjct 33929 ACATAAGACAGGCGAAGTCGCGGTGAAGTCCTTCGTCTCGGGAGATCAGCTCGTTACTGT 33988 Query 16254 AAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCG 16313 || | || ||||| ||| || ||||| | |||||| || ||||| || || |||| Sbjct 33989 GGGTGAGTCCAGGCATCAGTCCACGCTTCTTGAGCCAGAAGATGGCAGCGAAGGAACCCG 34048 Query 16314 AAAAGAATATACCCTCAACAGATGCAAAAGCGAT 16347 | || || || || ||||| | || || ||||| Sbjct 34049 AGAAAAAAATGCCTTCAACGGCGGCGAACGCGAT 34082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511404414633840