Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_001609.1 Length=11624 Score E Sequences producing significant alignments: (Bits) Value seq926 122 6e-24 >seq926 Length=20869 Score = 122 bits (134), Expect = 6e-24 Identities = 274/406 (67%), Gaps = 13/406 (3%) Strand=Plus/Minus Query 5132 TGAATAATCACCCGTCGGCGTGACACGCCGCCGCTGCGGTCGGTGAAGCGCATCGGGTTA 5191 |||| ||||||||| || || || || || || ||||| || |||| | ||| | |||| Sbjct 15550 TGAA-AATCACCCGACGCCGCGATACTCCACCACTGCGATCACTGAAACTCATGGCGTTA 15492 Query 5192 TTGTTCACGGCCAGAATCACCGCCGGGATGTGCGTGGAGTACGCATCCCGGTATTTCGGG 5251 |||||||| ||||| | ||| || || || | || || || | | | | |||||| Sbjct 15491 TTGTTCACTGCCAGCACCACAGCAGGAATACGAGTTGAATAGGGCTGCTTATGCTTCGGG 15432 Query 5252 TCAACGGACACCGCATCGCCGCCGGTGATGGCCTTGAGTCCGGCACCGTCGCCGCTCCAT 5311 || | ||| || |||| || || || || || || | || | ||| || || | ||| Sbjct 15431 TCGATGGAAACTTCATCCCCACCCGTAATTGCTTTAATGCCTGAACCATCACC--TACAT 15374 Query 5312 TT----TTCCTGGTCCGGCAGGCGTATCAGTGAGAAGCCAGTTAACGCGGCACGTTCACG 5367 || || || |||| || |||||| |||| | | || | || || Sbjct 15373 AGCGAGTT--TGATCAGGCAAAATGATGAGTGAGTAGCCCACAATCAGTGCCCTGTCCCG 15316 Query 5368 CGGGGATTCCAGCGTCTCGATGGTGGCCGACGTGGCGTTATCC--TCCCCGGCCAGCAGG 5425 | | |||||| | ||| | || || | ||| ||| | || ||||||| Sbjct 15315 TGCGTTTTCCAGTGCAGACATGTTTGCTGA--TACCGTATTCCCTTTGCCTGCCAGCATA 15258 Query 5426 GTGGCTATTTCGGCCATGATACTTTTGCCGCTGCCGCCGGGACCGGTCACCTCCAGAAAG 5485 || ||||| || | |||||||||||| ||||| |||| || ||||| || ||||| Sbjct 15257 GTACAGATTTCAGCAAAGATACTTTTGCCACTGCCTCCGGCTCCAGTCACTTCTAGAAAA 15198 Query 5486 AGCTGCCAGTCGTAGCGGTTTGCCAGCACCATAAACAGTGCAGCCA 5531 ||||||||||| |||||||| ||||| ||||| ||||| || |||| Sbjct 15197 AGCTGCCAGTCATAGCGGTTCGCCAGAACCATGAACAGCGCTGCCA 15152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37080948383584