Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1419 141 8e-29 seq652 132 4e-26 seq1526 120 3e-22 seq1117 114 1e-20 seq988 105 6e-18 seq1347 91.5 1e-13 seq1101 84.2 2e-11 >seq1419 Length=601844 Score = 141 bits (156), Expect = 8e-29 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || ||||||||||| |||||||| ||||| | || | |||||| Sbjct 538412 ACCAAGTGGAGGGTCGACTCTTTTTGGATGTTGTAGTCGCTGAGGGTTCTTCCGTCCTCG 538353 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || |||||| |||| || |||||||| |||||||| || || |||||||| Sbjct 538352 AGTTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCCTGG 538293 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | | ||||||||| | ||| | ||| || Sbjct 538292 ATCTTAGCCTTCACGTTCTCGATGGTGTCAGACCCCTCGACCTCCAGGGTAATCGTCTTT 538233 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || |||||||| || || || ||||||||| || Sbjct 538232 CCTGTCAGAGTCTTCACGAAGATCTGCATGCCT 538200 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || ||||||||||| |||||||| || |||| |||||| ||||||| Sbjct 538184 ACCAAGTGGAGGGTTGACTCTTTTTGGATGTTGTAGTCACTCAAAGTGCGGCCATCCTCG 538125 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || |||| | |||||||| || || || ||||||||||| ||| Sbjct 538124 AGCTGCTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTATCTTGG 538065 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | | ||| ||||| | ||| | ||| || Sbjct 538064 ATCTTAGCCTTCACGTTCTCGATGGTGTCGGATCCCTCAACCTCCAAGGTAATCGTCTTT 538005 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| || || || || || ||||| Sbjct 538004 CCGGTCAGCGTCTTGACGAAGATTTGCAT 537976 Score = 136 bits (150), Expect = 3e-27 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||||| | || || || || ||||| Sbjct 539138 GTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCTTCAAGCTG 539079 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| |||| |||||||||||||||||||| || || |||||||| || || Sbjct 539078 CTTGCCAGCGAAGATAAGACGCTGCTGATCGGGAGGGATTCCTTCCTTGTCCTGGATCTT 539019 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 ||| || | || | |||||| | | ||||||||| | ||| | ||| || ||||| Sbjct 539018 GGCTTTCACGTTCTCAATGGTGTCAGATCCCTCGACCTCCAGGGTGATCGTCTTTCCGGT 538959 Query 118715 CAGAGTTTTTACAAAAATCTGCATGGCT 118742 |||||| || || || ||||||||| || Sbjct 538958 CAGAGTCTTCACGAAGATCTGCATGCCT 538931 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || ||||| || || |||||||| ||||| | |||||| ||| || Sbjct 538640 ACCAAGTGGAGGGTCGACTCCTTCTGTATGTTGTAGTCGCTGAGAGTGCGGCCATCTTCC 538581 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||| || || || |||| | |||||||| || || || ||||||||||| ||| Sbjct 538580 AACTGCTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTATCTTGG 538521 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | | ||||||||| | || | ||| || Sbjct 538520 ATCTTAGCCTTCACGTTCTCGATGGTGTCAGACCCCTCGACCTCAAGAGTGATCGTCTTT 538461 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || |||||||| || || || ||||||||| || Sbjct 538460 CCTGTCAGAGTCTTCACGAAGATCTGCATGCCT 538428 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| ||||| | || || || || ||||| ||||| Sbjct 537944 GTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCTTCAAGCTGCTTTCCG 537885 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | ||||||||||||||||| |||||||||||||| || || || Sbjct 537884 GCGAAGATCAAGCGCTGCTGATCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 537825 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||||| ||||| | ||| ||||| | ||| | || || || || ||||| Sbjct 537824 ACATTTTCGATAGTGTCGGAAGCCTCAACCTCAAGGGTAATGGTCTTCCCCGTGAGAGTC 537765 Query 118722 TTTACAAAAATCTGCATG 118739 || || || || |||||| Sbjct 537764 TTGACGAAGATTTGCATG 537747 >seq652 Length=32697 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | ||| ||||| || | || ||||| || || |||||||| ||| | Sbjct 6888 CCACCGCGAAGGCGCAAAACCAAATGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGTTG 6829 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| || ||||||||||| || |||||| |||| |||||||||||||| ||||| Sbjct 6828 AGAGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCAGGAGGG 6769 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 |||||||||||||| || || || || | || | | ||| | | |||||| Sbjct 6768 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGAGTCAGAACCTTCGACC 6709 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || | ||| | || ||||| || ||||| || ||||| ||||||||| || Sbjct 6708 TCAAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATCTGCATGCCT 6658 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||| | | ||| || ||||||||||| Sbjct 6637 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGTTGAGAGTCCGGCCGTCCTCGAGCTG 6578 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| |||| |||||||||||||| ||||| |||||||||||||| || || Sbjct 6577 CTTGCCAGCGAAGATAAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTT 6518 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | | ||| | | |||||||| | ||| | || ||||| || Sbjct 6517 GGCCTTGACGTTCTCAATCGAGTCAGAACCTTCGACCTCAAGGGTGATGGTCTTGCCCGT 6458 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || ||||| |||||||| Sbjct 6457 AAGAGTCTTGACAAAGATCTGCAT 6434 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| ||| | | ||||| |||||| ||||| || ||| Sbjct 7086 GTTGACTCCTTCTGGATGTTGTAGTCGTTGAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 7027 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || || ||||||||||| || || ||||||||||||||| ||| || ||| Sbjct 7026 GCAAAAATAAGTCGCTGCTGATCTGGGGGAATGCCCTCCTTGTCTTGAATCTTGGCCTTA 6967 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| | || | | ||||| || | || | ||| || || || || || Sbjct 6966 ACGTTCTCGATCGAATCGGACCCTTCGACTTCCAAAGTAATCGTCTTTCCAGTAAGGGTC 6907 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 6906 TTCACAAAGATCTGCAT 6890 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || || || |||||||| || | | ||| || ||||||||||| |||||| Sbjct 11285 GTCGATTCCTTCTGGATGTTGTAGTCATTGAGAGTCCGGCCATCCTCGAGCTACTTTCCA 11226 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || ||||||| |||||||| |||||||| ||||||| ||||| | || || Sbjct 11225 GCAAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTTTTTGTCCTGGGTCTTGGCCTTG 11166 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | | ||| | | || ||||| | ||| | || || || || || || Sbjct 11165 ACGTTCTCAATCGAGTCAGCATTTTCTACCTCAAGGGTGATGGTCTTTCCCGTGAGGGTC 11106 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 11105 TTCACAAAGATCTGCAT 11089 >seq1526 Length=386723 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| |||| || || || || || |||||||| ||||| | ||| | ||||| Sbjct 246101 ACCAGATGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCTTCCGTCCTCA 246160 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || |||||| |||||||||||||||| |||||||| || || |||||||| Sbjct 246161 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGG 246220 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||||||| |||||| || | ||| | || || Sbjct 246221 ATCTTGGCCTTGACGTTCTCGATCGTGTCCGAAGCCTCGACTTCTAGGGTGATGGTCTTT 246280 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||||| || || || |||||||| Sbjct 246281 CCGGTCAGAGTCTTCACGAAGATCTGCAT 246309 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| |||| || || || || || |||||||| ||||| | || || || ||| Sbjct 246329 ACCAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCTTCG 246388 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || |||||| |||| || |||||||| || ||||| || || |||||||| Sbjct 246389 AGTTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGGAGGGATTCCTTCCTTGTCCTGG 246448 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||||| |||||| || | ||| | ||| || Sbjct 246449 ATCTTGGCCTTGACGTTCTCGATGGTGTCCGACGCCTCGACTTCCAGGGTGATCGTCTTT 246508 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||||||||||| || || || || |||||| || Sbjct 246509 CCGGTCAGAGTCTTCACGAAGATTTGCATGCCT 246541 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 118606 AGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCT 118665 |||| ||||||||||| |||||||| || || |||||||| ||| || || || | Sbjct 247478 AGATAAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGAATCTTGGCCTTGACGT 247537 Query 118666 GTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 118725 |||| ||||||| |||||| || | ||| | ||| || |||||||||||||| | Sbjct 247538 TCTCGATCGTGTCCGAAGCCTCGACTTCCAGGGTGATCGTCTTTCCGGTCAGAGTTTTCA 247597 Query 118726 CAAAAATCTGCATG 118739 | || || |||||| Sbjct 247598 CGAAGATTTGCATG 247611 >seq1117 Length=604131 Score = 114 bits (126), Expect = 1e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| ||| | | ||| || ||||||||||| || ||| Sbjct 393859 GTGGACTCCTTCTGGATGTTGTAGTCGTTGAGAGTCCGGCCGTCCTCGAGCTGCTTGCCA 393800 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| |||||||||||||| ||||| || ||||||||||| ||||| || Sbjct 393799 GCGAAGATAAGACGCTGCTGATCAGGAGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTG 393740 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | | ||| | | |||||||| | || | || ||||| || ||||| Sbjct 393739 ACGTTCTCAATTGAGTCAGAACCTTCGACCTCAAGTGTGATGGTCTTGCCCGTAAGAGTC 393680 Query 118722 TTTACAAAAATCTGCATGGCT 118742 || || || ||||||||| || Sbjct 393679 TTGACGAAGATCTGCATGCCT 393659 >seq988 Length=203328 Score = 105 bits (116), Expect = 6e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| |||||||||| ||||| || ||||| || || ||||||||| ||| || Sbjct 72309 TTACCGGCGAAGATGAGACGTTGCTGGTCAGGAGGGATTCCTTCCTTGTCTTGAATCTTG 72368 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | ||||| |||||| | | |||||||||| ||| | |||||| || || Sbjct 72369 GCCTTCACATTTTCGATGGTGTCGGAGGCTTCGACCTCGAGGGTGATCGTTTTACCCGTG 72428 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || ||||||||||| Sbjct 72429 AGGGTTTTGACGAAAATCTGCAT 72451 >seq1347 Length=405773 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| |||| || || || || ||||| || |||||||||||||| ||| || Sbjct 393127 TTACCGGCGAAGATCAGTCGTTGTTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTC 393186 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 ||||| | |||| | ||||| | || ||||||| ||| | |||||| || ||| Sbjct 393187 GCCTTAACATTCTCGATCGAGTCCGAGGCTTCCACCTCGAGGGTGATCGTTTTACCCGTC 393246 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || ||||||||||| Sbjct 393247 AGGGTTTTGACGAAAATCTGCAT 393269 >seq1101 Length=331277 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 118606 AGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCT 118665 |||| || |||||||| || ||||| || || ||||| || || || || || | Sbjct 90949 AGATCAGGCGCTGCTGGTCTGGAGGGATTCCTTCCTTATCCTGGATCTTGGCCTTGACAT 90890 Query 118666 GTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 118725 || | |||||| | | ||||||||||| ||| | || |||||||||| ||| || | Sbjct 90889 TCTCAATGGTGTCGGAGGCCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGA 90830 Query 118726 CAAAAATCTGCATGGC 118741 | |||||||||||||| Sbjct 90829 CGAAAATCTGCATGGC 90814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433822141224904