Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_003309.1 Length=53373 Score E Sequences producing significant alignments: (Bits) Value seq31 114 4e-21 >seq31 Length=5916 Score = 114 bits (126), Expect = 4e-21 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 43831 TGAAGGTCAAAGATCTGATGGGCCAGCCGTGGCGTCTTGCGTTTGCATTGCAGGATGCCG 43890 |||| | ||||| ||||| ||| |||||| || || || || ||| | | || Sbjct 4988 TGAAAGATAAAGACCTGATCGGCATTCCGTGGATGCTGGCCTTCGCCCTGCGTGCGGACG 5047 Query 43891 GCTGGTATCTCCGACAGGACATCATCTGGCACAAGCCGAACCCGATGCCCGAGAGCGTGC 43950 |||||||| | || ||||||||||| ||||| ||||||||||| ||||| ||||| |||| Sbjct 5048 GCTGGTATTTACGGCAGGACATCATATGGCATAAGCCGAACCCAATGCCGGAGAGTGTGC 5107 Query 43951 GCGACCGCTGCACTAAGGCACACGAATATCTGTTTCTGCTT 43991 |||| |||||||| || || || || ||| | || ||||| Sbjct 5108 GCGATCGCTGCACGAAAGCCCATGAGTATATTTTCTTGCTT 5148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170668834247740