Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq893 132 1e-25 >seq893 Length=1694367 Score = 132 bits (146), Expect = 1e-25 Identities = 252/362 (70%), Gaps = 13/362 (4%) Strand=Plus/Minus Query 364141 TCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCC 364200 |||||||| || || ||||| || || ||| | ||||| || | |||||||||||||| Sbjct 1630957 TCGCAGATCGAAACTGGAACTCCTTACATGCTCTACAAGGACGCCTGCAACCGCAAGTCG 1630898 Query 364201 AACCAGCAGCACCTTGGTACAATTCAGCAGAGC---AACCTATGTACCGAGATTATTGAA 364257 ||||||||| |||| || || || || || || ||||| || |||||||| || | Sbjct 1630897 AACCAGCAGAACCTGGGAACCAT-CA--AGTGCTCTAACCTGTGCACCGAGATCGTTCAG 1630841 Query 364258 TACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCT-TCCGGCGTT 364316 ||| | | || || || ||||| || ||| | || ||||||||||| | || || Sbjct 1630840 TACTCGTCGCCGGAAGAAGTCGCCGTGTGCAACTTGGCTTCGATCGCGCTGAACCGC-TT 1630782 Query 364317 TGTAAAAGATG---GTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTAC 364373 || || || | || || ||| | || | || ||| | ||| | | || Sbjct 1630781 CGTCAAGGAGGACAAGACCTTCGACTATGAGAAGCTCCATGCGATCACCAAAGTCGTCAC 1630722 Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCG-AGCGTT 364432 | |||| || ||||| |||||||| || || || || |||| || |||| | || | Sbjct 1630721 TCGCAACCTTAACAAGATTATCGACGGCAACTACTACCCGATTCTCGAGGCCGCAACG-T 1630663 Query 364433 CTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGA 364492 | ||||||||||| || || ||||| |||| || || ||||| || |||| ||| |||| Sbjct 1630662 CCAATATGCGTCACCGTCCTATTGGAATTGGCGTTCAAGGCCTTGCGGACGCTTTCATGA 1630603 Query 364493 TG 364494 || Sbjct 1630602 TG 1630601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303327515821484