Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1526 141 9e-29 seq1419 134 1e-26 seq1117 123 2e-23 seq652 114 1e-20 seq893 104 2e-17 seq1101 95.1 1e-14 seq988 89.7 5e-13 >seq1526 Length=386723 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | ||| | || || ||||| || |||||||| ||||| Sbjct 246082 GCCACCACGGAGACGGAGGACCAGATGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCT 246141 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || | |||||| ||||||||||| ||| |||| | |||||||||||| ||||| Sbjct 246142 GAGAGTCCTTCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGG 246201 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||| ||||| ||| || ||||| | ||| | || || | | ||||| Sbjct 246202 GATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTGTCCGAAGCCTCGAC 246261 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| ||||| || ||||| |||||||| Sbjct 246262 TTCTAGGGTGATGGTCTTTCCGGTCAGAGTCTTCACGAAGATCTGCAT 246309 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | ||| | || || ||||| || |||||||| ||||| Sbjct 246311 CCTCCACGGAGACGGAGGACCAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGCTG 246370 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||| || || |||||||| ||| |||| | ||||||||||| |||||| Sbjct 246371 AGGGTACGGCCGTCTTCGAGTTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGGAGGG 246430 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || ||||| | ||| | || || | | ||||| Sbjct 246431 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGACGCCTCGACT 246490 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||| | || || ||||| ||||| || ||||| || |||||| || Sbjct 246491 TCCAGGGTGATCGTCTTTCCGGTCAGAGTCTTCACGAAGATTTGCATGCCT 246541 Score = 82.4 bits (90), Expect = 7e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 131091 CTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTT 131150 ||| || || |||| | |||||||||||| |||||||||||||| ||||| || || Sbjct 247467 CTTACCGGCAAAGATAAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGAATCTT 247526 Query 131151 CTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 ||||| | ||| | || || | | ||||| || | ||| | || || ||||| Sbjct 247527 GGCCTTGACGTTCTCGATCGTGTCCGAAGCCTCGACTTCCAGGGTGATCGTCTTTCCGGT 247586 Query 131211 TAGAGTTTTTACGAAAATCTGCATG 131235 |||||||| ||||| || |||||| Sbjct 247587 CAGAGTTTTCACGAAGATTTGCATG 247611 >seq1419 Length=601844 Score = 134 bits (148), Expect = 1e-26 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | || | |||||||||||| || |||||||| ||||| Sbjct 539162 GCCACCACGAAGACGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCT 539103 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || ||| || ||||||||||| ||| |||| | ||||||||| || ||||| Sbjct 539102 GAGGGTACGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCGGGAGG 539043 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||| ||||| ||| || || | | ||| | || || | ||||| Sbjct 539042 GATTCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCAATGGTGTCAGATCCCTCGAC 538983 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||| | || || ||||| ||||| || ||||| ||||||||| || Sbjct 538982 CTCCAGGGTGATCGTCTTTCCGGTCAGAGTCTTCACGAAGATCTGCATGCCT 538931 Score = 131 bits (144), Expect = 2e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| || || || || | ||||||||| ||||| |||||||| ||||| Sbjct 538431 GCCTCCACGGAGACGGAGGACCAAGTGGAGGGTCGACTCTTTTTGGATGTTGTAGTCGCT 538372 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| | |||||| || |||||||| ||| |||| | ||||||||||| ||||| Sbjct 538371 GAGGGTTCTTCCGTCCTCGAGTTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCGGGAGG 538312 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||| || ||| | | ||| | || || | ||||| Sbjct 538311 AATTCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATGGTGTCAGACCCCTCGAC 538252 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||||| || || || || ||||| || ||||| ||||||||| || Sbjct 538251 CTCCAGGGTAATCGTCTTTCCTGTCAGAGTCTTCACGAAGATCTGCATGCCT 538200 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| || || || || | ||| ||||| ||||| |||||||| || || Sbjct 538203 GCCTCCACGGAGACGGAGGACCAAGTGGAGGGTTGACTCTTTTTGGATGTTGTAGTCACT 538144 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| ||||| ||||||||||| || |||| || ||||||||||| || || Sbjct 538143 CAAAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGG 538084 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || || || ||| || ||| | | ||| | || |||| ||| | Sbjct 538083 AATGCCCTCCTTATCTTGGATCTTAGCCTTCACGTTCTCGATGGTGTCGGATCCCTCAAC 538024 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| || || ||||| || || || ||||| || ||||| Sbjct 538023 CTCCAAGGTAATCGTCTTTCCGGTCAGCGTCTTGACGAAGATTTGCAT 537976 Score = 98.7 bits (108), Expect = 9e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| || || || || | |||||||||||| || |||||||| ||||| Sbjct 538659 GCCTCCACGGAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGTATGTTGTAGTCGCT 538600 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| || || | ||||||||| || |||| || ||||||||||| || || Sbjct 538599 GAGAGTGCGGCCATCTTCCAACTGCTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGG 538540 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || || || ||| || ||| | | ||| | || || | ||||| Sbjct 538539 AATGCCCTCCTTATCTTGGATCTTAGCCTTCACGTTCTCGATGGTGTCAGACCCCTCGAC 538480 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | || | || || || || ||||| || ||||| ||||||||| || Sbjct 538479 CTCAAGAGTGATCGTCTTTCCTGTCAGAGTCTTCACGAAGATCTGCATGCCT 538428 >seq1117 Length=604131 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||| |||||||| || |||||||| ||| | Sbjct 393889 CCACCACGGAGACGAAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGTTG 393830 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| ||||||||||| ||| |||| | ||||||||| || |||||| Sbjct 393829 AGAGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCAGGAGGG 393770 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| |||||| ||||| | ||| | | || | |||| Sbjct 393769 ATTCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTCTCAATTGAGTCAGAACCTTCGACC 393710 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | || | ||| || || || ||||| || ||||| ||||||||| || Sbjct 393709 TCAAGTGTGATGGTCTTGCCCGTAAGAGTCTTGACGAAGATCTGCATGCCT 393659 >seq652 Length=32697 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | |||| || ||||| | || |||||||| || |||||||| ||| | Sbjct 6888 CCACCGCGAAGGCGCAAAACCAAATGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGTTG 6829 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| ||||||||||| ||| |||| | ||||||||| || |||||| Sbjct 6828 AGAGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCAGGAGGG 6769 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | ||| | | || | |||| Sbjct 6768 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGAGTCAGAACCTTCGACC 6709 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||| | ||| || || || ||||| || || || ||||||||| || Sbjct 6708 TCAAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATCTGCATGCCT 6658 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| || || | || | ||| |||||||| || |||||||| ||| | Sbjct 6661 GCCTCCACGAAGACGAAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGTT 6602 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || |||||| ||||||||||| ||| |||| | ||||||||| || ||||| Sbjct 6601 GAGAGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCAGGAGG 6542 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | ||| | | || | |||| Sbjct 6541 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGAGTCAGAACCTTCGAC 6482 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || ||||| || || || |||||||| Sbjct 6481 CTCAAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATCTGCAT 6434 >seq893 Length=1694367 Score = 104 bits (114), Expect = 2e-17 Identities = 124/165 (75%), Gaps = 4/165 (2%) Strand=Plus/Plus Query 145625 GCGATCGACGCCAAATTACAAACTGCCGTCTCCT--CGGCGTCGCTGTATTGTACGATCT 145682 |||||||| ||||| || || || || | || || ||||| || ||| || ||||||| Sbjct 1630794 GCGATCGAAGCCAAGTTGCACACGGC-GACTTCTTCCGGCGACGA-GTACTGAACGATCT 1630851 Query 145683 CGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGC 145742 ||| ||||| || || |||||||||||||| || ||||| || || | ||||| Sbjct 1630852 CGGTGCACAGGTTAGAGCACTTGATGGTTCCCAGGTTCTGCTGGTTCGACTTGCGGTTGC 1630911 Query 145743 ACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCG 145787 | |||||||||||||||||||| || ||||| || | ||||| Sbjct 1630912 AGGCGTCCTTGTAGAGCATGTAAGGAGTTCCAGTTTCGATCTGCG 1630956 >seq1101 Length=331277 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 131091 CTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTT 131150 ||| || || |||| | ||||||||||| |||||||||||||| || || ||| || Sbjct 90960 CTTACCGGCAAAGATCAGGCGCTGCTGGTCTGGAGGGATTCCTTCCTTATCCTGGATCTT 90901 Query 131151 CTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 ||||| | ||| | || |||| || ||||| |||| ||| | ||| || ||||| Sbjct 90900 GGCCTTGACATTCTCAATGGTGTCGGAGGCCTCGACCTCGAGGGTGATGGTCTTGCCGGT 90841 Query 131211 TAGAGTTTTTACGAAAATCTGCATG 131235 | ||| || ||||||||||||||| Sbjct 90840 CAAAGTCTTGACGAAAATCTGCATG 90816 >seq988 Length=203328 Score = 89.7 bits (98), Expect = 5e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 131091 CTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTT 131150 ||| || ||| |||| | ||| |||||||| |||||||||||||| ||||| || || Sbjct 72308 CTTACCGGCGAAGATGAGACGTTGCTGGTCAGGAGGGATTCCTTCCTTGTCTTGAATCTT 72367 Query 131151 CTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 ||| | | || | || |||| || |||| |||| ||| | |||||||| || Sbjct 72368 GGCCTTCACATTTTCGATGGTGTCGGAGGCTTCGACCTCGAGGGTGATCGTTTTACCCGT 72427 Query 131211 TAGAGTTTTTACGAAAATCTGCATGAC 131237 || ||||| |||||||||||||| || Sbjct 72428 GAGGGTTTTGACGAAAATCTGCATTAC 72454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472003583950080