Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq1458 87.8 2e-12 >seq1458 Length=193436 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 66195 TCAACCATGCCGTCCTGTTGGTCGGGTTCGGCATCGAGTTCGACACGCCCTACTGGATCC 66254 || |||| |||||||| | || |||| ||| | |||| |||| |||| ||||||| Sbjct 81233 TCGACCACGCCGTCCTCCTCGTAGGGTACGGTACCGAGAACGACGTCCCCTTCTGGATCG 81292 Query 66255 TCAAGAACAGCTGGGGCAACGATTGGGGCGAAAAGGGCTATTTCCG 66300 | ||||||||||||||| |||||||||||| | || |||||||| Sbjct 81293 TGAAGAACAGCTGGGGCGCCGATTGGGGCGAGAGCGGATATTTCCG 81338 Score = 86.0 bits (94), Expect = 7e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 66194 CTCAACCATGCCGTCCTGTTGGTCGGGTTCGGCATCGAGTTCGACACGCCCTACTGGATC 66253 ||| | || |||||||| | ||||| | ||| | |||| |||| |||| ||||||| Sbjct 78465 CTCGATCACGCCGTCCTTCTTGTCGGCTACGGTACCGAGAACGACGTCCCCTTCTGGATC 78406 Query 66254 CTCAAGAACAGCTGGGGCAACGATTGGGGCGAAAAGGGCTATTTCCG 66300 | ||||||||||||||| |||||||||||| | || |||||||| Sbjct 78405 GTGAAGAACAGCTGGGGCGCCGATTGGGGCGAGAGCGGATATTTCCG 78359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537592703297520