Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1117 152 1e-31 seq1526 147 5e-30 seq1419 147 5e-30 seq652 127 5e-24 seq1101 102 2e-16 seq988 95.1 3e-14 seq1347 91.5 3e-13 >seq1117 Length=604131 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| |||||||||| ||| || || ||||| || |||||| | Sbjct 393889 CCACCACGGAGACGAAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGTTG 393830 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| |||||||| ||| | ||| Sbjct 393829 AGAGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCAGGAGGG 393770 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || || ||||||||||| || || ||||| || || || || ||| || Sbjct 393769 ATTCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTCTCAATTGAGTCAGAACCTTCGACC 393710 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || |||||||||||||| |||||||| Sbjct 393709 TCAAGTGTGATGGTCTTGCCCGTAAGAGTCTTGACGAAGATCTGCAT 393663 >seq1526 Length=386723 Score = 147 bits (162), Expect = 5e-30 Identities = 172/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || ||||| | || || ||||| | ||| ||| || ||||| || |||||| Sbjct 246310 TCCTCCACGGAGACGGAGGACCAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGCT 246369 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || || |||||||| | ||| || || |||||||| || ||||| || ||||| Sbjct 246370 GAGGGTACGGCCGTCTTCGAGTTGCTTGCCAGCGAAGATAAGGCGCTGCTGG---TCTGG 246426 Query 288366 ---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||||||||| || |||||||| || || || ||||| || || | || || || Sbjct 246427 AGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGACGCCTC 246486 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||||||||| |||||||||||||| ||||| || ||||| Sbjct 246487 GACTTCCAGGGTGATCGTCTTTCCGGTCAGAGTCTTCACGAAGATTTGCAT 246537 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || ||||| | |||| ||| || ||||| || |||||| | Sbjct 246083 CCACCACGGAGACGGAGGACCAGATGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTG 246142 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | |||||| || | || || || |||||||| |||||||| || ||| Sbjct 246143 AGAGTCCTTCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 246202 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || |||||||| || || || ||||| || || | || | || ||| Sbjct 246203 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTGTCCGAAGCCTCGACT 246262 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || ||||| ||||| |||||||||||||| ||||| ||||||||| Sbjct 246263 TCTAGGGTGATGGTCTTTCCGGTCAGAGTCTTCACGAAGATCTGCATT 246310 Score = 104 bits (114), Expect = 6e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396 |||||||| || ||||| || ||||||||||| || |||||||| || || ||| Sbjct 247199 GCGAAGATAAGGCGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTC 247258 Query 288397 ACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 ||||| || || | || || || ||||| || ||||||||||| |||||||||||| Sbjct 247259 ACGTTCTCGATCGTGTCCGACGCCTCGACTTCCAGGGTGATCGTCTTTCCGGTCAGAGTC 247318 Query 288457 TTGACGAATATCTGCAT 288473 || ||||| || ||||| Sbjct 247319 TTCACGAAGATTTGCAT 247335 Score = 87.8 bits (96), Expect = 4e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || || ||||| |||||||| || ||||||||||| || ||||| || || Sbjct 247468 TTACCGGCAAAGATAAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGAATCTTG 247527 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || || ||||| || || | || | || ||||| || ||||||||||| |||||| Sbjct 247528 GCCTTGACGTTCTCGATCGTGTCCGAAGCCTCGACTTCCAGGGTGATCGTCTTTCCGGTC 247587 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| || ||||| Sbjct 247588 AGAGTTTTCACGAAGATTTGCAT 247610 >seq1419 Length=601844 Score = 147 bits (162), Expect = 5e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | || || || ||||| || |||||| | Sbjct 539161 CCACCACGAAGACGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTG 539102 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | || || || |||||||| |||||||| ||| ||| Sbjct 539101 AGGGTACGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCGGGAGGG 539042 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC-GCTCGATTCTAC 288425 |||||||| || |||||||| || ||||||||||| || || | || | || || || Sbjct 539041 ATTCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCAATGGTGTCAGATC-CCTCGAC 538983 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||| |||||||||||||| ||||| |||||||| Sbjct 538982 CTCCAGGGTGATCGTCTTTCCGGTCAGAGTCTTCACGAAGATCTGCAT 538935 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| ||||| || | ||| |||||||| | ||| || || ||||| || |||||| Sbjct 537975 TCCTCCGCGAAGACGAAGAACGAGATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGCT 537916 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || || |||||||| | || ||||| |||||||||| ||||| ||| || Sbjct 537915 GAGGGTACGGCCGTCTTCAAGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGATCGGGAGG 537856 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || |||||||| || || || || ||||| |||| ||| | || || Sbjct 537855 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTTTCGATAGTGTCGGAAGCCTCAAC 537796 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || |||||||| || |||||||||||||| || ||||| Sbjct 537795 CTCAAGGGTAATGGTCTTCCCCGTGAGAGTCTTGACGAAGATTTGCAT 537748 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||||||||| || |||||| ||| || | |||||| || | ||| || || |||||| Sbjct 538394 TCTTTTTGGATGTTGTAGTCGCTGAGGGTTCTTCCGTCCTCGAGTTGCTTGCCAGCGAAG 538335 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || || |||||||| || |||||||| || || |||||||| Sbjct 538334 ATAAGGCGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTC 538275 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || | || || || || || |||||||| || ||||||||||| ||| Sbjct 538274 TCGATGGTGTCAGACCCCTCGACCTCCAGGGTAATCGTCTTTCCTGTCAGAGTCTTCACG 538215 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 538214 AAGATCTGCAT 538204 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || |||||| ||| ||||| || ||||| || || || || || ||| Sbjct 538622 TCCTTCTGTATGTTGTAGTCGCTGAGAGTGCGGCCATCTTCCAACTGCTTGCCGGCAAAG 538563 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| ||||| || |||||| || || || ||||| ||||| || || |||||| Sbjct 538562 ATCAATCGCTGCTGG---TCTGGGGGAATGCCCTCCTTATCTTGGATCTTAGCCTTCACG 538506 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || || || || ||||||||||| || ||||||||||| Sbjct 538505 TTCTCGATGGTGTCAGACCCCTCGACCTCAAGAGTGATCGTCTTTCCTGTCAGAGTCTTC 538446 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 538445 ACGAAGATCTGCAT 538432 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/198 (72%), Gaps = 12/198 (6%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||||||||| || ||||| | ||||| || || || | || || || || ||| Sbjct 538166 TCTTTTTGGATGTTGTAGTCACTCAAAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 538107 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| ||||| || |||||| || || || ||||| ||||| || || |||||| Sbjct 538106 ATCAATCGCTGCTGG---TCTGGGGGAATGCCCTCCTTATCTTGGATCTTAGCCTTCACG 538050 Query 288400 TTTTCTATAGAATCGCTCGAT---TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||| ||| || || || | || |||||||| |||||||| ||| Sbjct 538049 TTCTCGATGGTGTCG---GATCCCTCAACCTCCAAGGTAATCGTCTTTCCGGTCAGCGTC 537993 Query 288457 TTGACGAATATCTGCATT 288474 |||||||| || |||||| Sbjct 537992 TTGACGAAGATTTGCATT 537975 Score = 86.0 bits (94), Expect = 1e-11 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || || ||||| || ||||| || || |||||||| || |||||||| || Sbjct 538802 TTACCGGCAAAGATAAGGCGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCCTGGATCTTG 538743 Query 288391 GCTTTCACGTTTTCTATAGAATC-GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGT 288449 || |||||||| || || | || | || | | || || || || |||||||| ||||| Sbjct 538742 GCCTTCACGTTCTCGATGGTGTCAGATCCCT-CAACCTCAAGAGTAATCGTCTTTCCGGT 538684 Query 288450 CAGAGTCTTGACGAATATCTGCAT 288473 ||||||||| ||||| |||||||| Sbjct 538683 CAGAGTCTTCACGAAGATCTGCAT 538660 >seq652 Length=32697 Score = 127 bits (140), Expect = 5e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||||||||| || | | || | ||||| |||| || || ||||| || |||||| Sbjct 6889 TCCACCGCGAAGGCGCAAAACCAAATGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGTT 6830 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || || ||||| || | || || || |||||||| |||||||| ||| | || Sbjct 6829 GAGAGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCAGGAGG 6770 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| || || || |||||||| || || || ||||| || || || || ||| || Sbjct 6769 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGAGTCAGAACCTTCGAC 6710 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || ||||||||||| || |||||||| Sbjct 6709 CTCAAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATCTGCAT 6662 Score = 122 bits (134), Expect = 2e-22 Identities = 167/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || || || | ||| ||||| || | ||| || || ||||| || |||| Sbjct 6664 CATG-CCTCCACGAAGACGAAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGT 6606 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 || ||| || || ||||| || | || || || |||||||| |||||||| ||| | Sbjct 6605 CGTTGAGAGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCAG 6546 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || |||||||| || || || ||||| || || || || || Sbjct 6545 GAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGAGTCAGAACCTT 6486 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || ||||| ||||| || || ||||||||||| || |||||||| Sbjct 6485 CGACCTCAAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATCTGCAT 6434 >seq1101 Length=331277 Score = 102 bits (112), Expect = 2e-16 Identities = 111/146 (76%), Gaps = 6/146 (4%) Strand=Plus/Minus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATT 288387 || || || |||||||| ||||| || ||||| ||||||||| ||||||||||| Sbjct 90959 TTACCGGCAAAGATCAGGCGCTGCTGG---TCTGGAGGGATTCCTTCCTTATCCTGGATC 90903 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 || || || || || || || | ||| | || || ||||| ||||| ||||| ||| Sbjct 90902 TTGGCCTTGACATTCTCAATGGTGTCGGAGGCCTCGACCTCGAGGGTGATGGTCTTGCCG 90843 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 |||| |||||||||||| |||||||| Sbjct 90842 GTCAAAGTCTTGACGAAAATCTGCAT 90817 >seq988 Length=203328 Score = 95.1 bits (104), Expect = 3e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || |||||||| ||||| || || | ||||||||||| || || || || || Sbjct 72309 TTACCGGCGAAGATGAGACGTTGCTGGTCAGGAGGGATTCCTTCCTTGTCTTGAATCTTG 72368 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || ||||| ||||| || | ||| | ||| || ||||| |||||||| || || || Sbjct 72369 GCCTTCACATTTTCGATGGTGTCGGAGGCTTCGACCTCGAGGGTGATCGTTTTACCCGTG 72428 Query 288451 AGAGTCTTGACGAATATCTGCATTA 288475 || || |||||||| |||||||||| Sbjct 72429 AGGGTTTTGACGAAAATCTGCATTA 72453 >seq1347 Length=405773 Score = 91.5 bits (100), Expect = 3e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || ||||||||||| || ||||| ||||| || || || ||||| || ||| Sbjct 393127 TTACCGGCGAAGATCAGTCGTTGTTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTC 393186 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || || || || || || || || | ||| || ||||| |||||||| || || ||| Sbjct 393187 GCCTTAACATTCTCGATCGAGTCCGAGGCTTCCACCTCGAGGGTGATCGTTTTACCCGTC 393246 Query 288451 AGAGTCTTGACGAATATCTGCATTA 288475 || || |||||||| |||||||||| Sbjct 393247 AGGGTTTTGACGAAAATCTGCATTA 393271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179630791429036